Gene Svir_21720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21720 
Symbol 
ID8387496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2338606 
End bp2338971 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID644976225 
Producthypothetical protein 
Protein accessionYP_003134007 
Protein GI257056175 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.803231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AGGCCAAACG CGTCACGTAT CGCCGGATCT ACGACGATCC CACTCCCTCG 
GACGGCACCC GGGTGCTGGT CGACCGGATC TGGCCGCGCG GTCTGAAGAA GGAGAACGCA
CATTACGACG AGTGGCTCCG CGAGGTCGCT CCCTCCACCG AACTGCGCAC GTGGTACGGC
CACGACCCGA AGAAGTTCGC CGAATTCCGG CGACGCTATC TCACTGAACT GGGCGACTCG
GAACACGCCG CACGGCTGCG GGAGATCGCC GAGCGCGGCA ACGTGACCCT GCTGACCGCC
AGTCGCGACA TCGAGCACAG TCAGGCCGCC GTCCTCGCGG AATGGCTGAG CGGGTCCACC
GACTGA
 
Protein sequence
MAKQAKRVTY RRIYDDPTPS DGTRVLVDRI WPRGLKKENA HYDEWLREVA PSTELRTWYG 
HDPKKFAEFR RRYLTELGDS EHAARLREIA ERGNVTLLTA SRDIEHSQAA VLAEWLSGST
D