Gene Svir_21530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21530 
Symbol 
ID8387477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2317478 
End bp2318821 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content67% 
IMG OID644976208 
Productamidohydrolase, imidazolonepropionase 
Protein accessionYP_003133990 
Protein GI257056158 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTCA CGGTGGGTGA GACGGCAGAA CGCCCCGAGG CGGGGATCCT CATCCGGAAC 
GCACGGATCT TCGACGGACT CAGCGACGAA GTCCGCCCGG GGCACGTCCG GATCGACGGT
CGGAAGATCG CACACGTCGG CCACGGCGAA CCACCTCCGC CCACCGAGTC CGACCACATC
GTGATCGACG CGGGCGGTCG AACACTGATC CCAGGTCTCA GTGACGCCCA CGCCCACGTC
ATGCTGACCG GGTCCTCCCC CACCGCGCTG TTGGCCAGCG GTGCCGGGTT GGGTTATCTC
ACCGGTGCGG CCGAGGCCGA GGCGATGTTG CTGCGCGGGT TCACCACCAT CCGGGACATG
GCCGGCGACA CCGGTGAGCT CAAACGACTG ATCGACGCCG GCCGCTTGAG AGGTCCTCGG
ATCTACCCCA GTCAGGCGGG GATCTCCCAG ACCGCCGGGC ACGGAGACTT CGGCATGATC
TACGAGTCCC CCACCGTGCT CGGCGGCACT CCCTCCCGAG CCGAGGAACT GGGGGTCATG
CGGGTCGCGA ACGGACGCCC ACAAGTCCTC GCCGCGGTGC GGGAACAGCT CAAAAAAGGC
GCCTCCCAGA TCAAACTGAT GGCGGGCGGC GGTGCGGCCT CGCTCTACGA CCCCTTGGAC
GTGTTGCAGT TCACCGCCGA CGAGATGCGC GCCGCGGTGG AGGCGGCCAC CGATTGGGGC
ACCTACGTGG CCGTGCACGT CTACACCGGT CCCGGTATCC GCCGGGCGCT CGAGTCCGGT
GTCACGGTGA TCGAACACGG GCAATTGGCC ACCGAGGACG ACATCAAACG CATGGCCGAC
CACGGTGCCT GGTTGAGCAC CCAGCCGTTC GTCGAGGACG ACCACACGTA CGCCGATCCG
ATCTTGGCCG AGAAGAACCG CCGAATCTGC ACCGGGGTGG AACGGACCTT CGCGTGGGCG
CTCGAACACG GGGTCAACAT CGCCTTCGGC ACGGATCTGC TCCTGGACCC GAGCAAAAGC
GGTAGACAAA GTGAGATGCT GACCCGGTTG GCCTCCCTCT GCGGCAGTTC GCTGGCCGGG
TTGCGGGTCG CCACCTCCGG AAACGCCGAA CTGTTCCGCC TGTCCGGAAA CCGCGACCCC
TACCAATCCC CCACCCTGAC GGAAAGCGAC GGGGCCGCCC GCCCTCCGCA CCACAACCGT
CTGGGGGTTC TCGCCGAAGG CGCCTGGGCG GACATGTTGC TGGTGGACGG CGATCCCACC
CGGGATCTCG GCCTCCTCGG TGATCCCGAC AGCAACCTGC GGCTGATCAT CAAGGACGGC
CGGGTCCACA AGAACACCCT GTGA
 
Protein sequence
MTVTVGETAE RPEAGILIRN ARIFDGLSDE VRPGHVRIDG RKIAHVGHGE PPPPTESDHI 
VIDAGGRTLI PGLSDAHAHV MLTGSSPTAL LASGAGLGYL TGAAEAEAML LRGFTTIRDM
AGDTGELKRL IDAGRLRGPR IYPSQAGISQ TAGHGDFGMI YESPTVLGGT PSRAEELGVM
RVANGRPQVL AAVREQLKKG ASQIKLMAGG GAASLYDPLD VLQFTADEMR AAVEAATDWG
TYVAVHVYTG PGIRRALESG VTVIEHGQLA TEDDIKRMAD HGAWLSTQPF VEDDHTYADP
ILAEKNRRIC TGVERTFAWA LEHGVNIAFG TDLLLDPSKS GRQSEMLTRL ASLCGSSLAG
LRVATSGNAE LFRLSGNRDP YQSPTLTESD GAARPPHHNR LGVLAEGAWA DMLLVDGDPT
RDLGLLGDPD SNLRLIIKDG RVHKNTL