Gene Svir_21510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21510 
Symbol 
ID8387475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2316223 
End bp2317065 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID644976207 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_003133989 
Protein GI257056157 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGC AAGACCCGGC GACGCGCGAC CATTCGACGC CCGCGGACGC GTGGCACCCG 
CTGAGACGAC TCACCCGGGC TCGGATCGGT CTGGGACGCA CCGGTGACGC GGTCCCGTTG
CGGAGTGTGC TCGAGTTCCG CGCCGACCAC GCCATCGCTC GGGACGCCAT CCACCAGGCC
CTCGATCTCT CCGAACTGTG TGCCGCCGTG GCCGCGGTGG GTGCTGGCAC GCCGACCGTG
CTGCACAGCC GAGTGCGGGA CCGGCAGGAG TATCTGCGTC GTCCCGACCT GGGACGGCTT
CCCTCCTCCC TCGATGCGTT GTCCCCCAGC GGGGCCGATG TGGGGATCGT ACTCGCCGAC
GGACTGTCCC CACGAGCGTT GGCGGTCCAC GGTCCGCCGT TGCTGTCCGC CCTGGTGAAC
GAACTGAGTC CGAGGTACTC GATCGCCGCT CCGGTCATCG CCATGCAGGC CAGGGTGGCG
ATCGGTGATC ACATCGGTGC CGCGCTCGAC GTGGGGACCG TGCTCGTCGT GATCGGCGAA
CGTCCCGGGT TGTCCGTCGC CGACAGTCTC GGCGTCTACC TGACCCACCA CCCACGCCCG
GGCCGAACCG ACGCGGAGCG TAACTGCGTG TCGAACATCC ACCCCCCGGA CGGTCTCGGC
TACGAACACG CCGCCGCCAC CGTCCTGCGG TTGGTCACCG GAGCCCGCGA GCTCGGCCGA
TCGGGCGTGG CGTTGAAGGA CACCGGCTCC GACAACGTGC CTCTCGACGG CTCCACGGGC
GCGCGGTCAC TGTGGGAGAG CCTCGAAACG GCTCCGGACG GCGACGCACC GACCGACGGG
TGA
 
Protein sequence
MTTQDPATRD HSTPADAWHP LRRLTRARIG LGRTGDAVPL RSVLEFRADH AIARDAIHQA 
LDLSELCAAV AAVGAGTPTV LHSRVRDRQE YLRRPDLGRL PSSLDALSPS GADVGIVLAD
GLSPRALAVH GPPLLSALVN ELSPRYSIAA PVIAMQARVA IGDHIGAALD VGTVLVVIGE
RPGLSVADSL GVYLTHHPRP GRTDAERNCV SNIHPPDGLG YEHAAATVLR LVTGARELGR
SGVALKDTGS DNVPLDGSTG ARSLWESLET APDGDAPTDG