Gene Svir_21500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21500 
Symbol 
ID8387474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2314844 
End bp2316226 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content67% 
IMG OID644976206 
ProductEthanolamine ammonia-lyase heavy chain 
Protein accessionYP_003133988 
Protein GI257056156 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTACA CGTTCCCCGG ACTGATCGAT GTGATGGCGA AAGCCTCACC CCCACGATCG 
GGTGACGAGC TCGCCGGGTG CGCCGCGGAC TCGGACGGCG AGCGTGCCGC CGCGCAATGG
GTGCTCGCCG ACATCCCGTT GACCGCTTTC CTGAACGACG TCCTGATCCC CTACGAGGAC
GACGAGGTCA CCCGGCTGAT CATCGACAGC CACGACGCGA CGGCGTTCGA ACCCCTCTCG
CACCTGACCG TCGGAGAGTT TCGCGACTGG CTGCTCGACA CCGCGGCACG TGAGGACGGA
GGCGCGGAGC TGGCGGCGCT CGCACCCGGT CTGACCCCGG AGATGGTGGC CGCGGTCTCC
AAGCTGATGC GCAACCAAGA CCTCATCGCC GTCTCCCGCG CCATCACCCA CACGTCCGCT
TTCCGCACCA CCATCGGCCT GCCCGGTCGA CTGAGCACAC GCTTGCAGCC CAACCATCCG
ACCGACGATC CTCGTGGTGT CGCCGCCGCC GTCCTCGACG GCCTGCTGCT GGGTTGCGGT
GACGCGGTCA TCGGGGTCAA CCCGGCCAGT GACTCCCCCC GCCACGTGGC CGAGCTGCTG
TACCTGCTCG ACGAGATCCG CCAGCGGTAT CGCATCCCGA CGCAATCCTG TGTGCTGACA
CATGTGACCA CCACGATCGA ACTGATCGGC GAGGGTGTGC CGGTGGACCT GGTGTTCCAG
TCGATCGCCG GAACCGAGGC CGCGAACCGG GCCTTCGGCG TCTCCCTGGA ACTTTTGGCC
GAAGCCCACG ACGCGGGACG CGCGCTGCGA CGTGGGACGG TCGGGAACAA CGTCATGTAT
TTCGAGACCG GGCAGGGAAC GGAACTGTCG GCCGACTCCC ATCTCGGTGT CGACGGGAAA
CCCGTGGATC AGCAGACGCT GGAGGCCCGG ACGTACGCGG TCGCCCGTGC TTTCGAACCG
TTGCTGGTGA ACACCGTCGT GGGGTTCATC GGTCCGGAAT ACCTCTACGA CGCCAAGCAG
ATCACCCGTG CCGGTTTGGA GGACCACTTC TGCGGGGCTC TACTCGGCCT GCCGATGGGT
GTGGACGTCT GCTACACCAA TCACGCCGTC GCCGACCAGG ACGACATGGA CGTCCTGGTG
ACGCTGCTCG CGGCCGCCGG GTGCGCGTTC GTCATCACCG TGCCCGGCGC CGACGACGTG
ATGCTGGGCT ACCAAAGCCT GTCCTTCCAC GACGCGCTGT ACGTCCGGCG ACTGCTGGGG
CTACGGCCAG CCCCGGAGTT CGAACGGTGG CTGCGCGAAC TGGCCCTGGC CGACGAACGT
GGCCGGGTCC TGCCGACGGC GTTGGACTCC TCACCGCTAC GAGAGTTGGT GAGCACACTG
TGA
 
Protein sequence
MNYTFPGLID VMAKASPPRS GDELAGCAAD SDGERAAAQW VLADIPLTAF LNDVLIPYED 
DEVTRLIIDS HDATAFEPLS HLTVGEFRDW LLDTAAREDG GAELAALAPG LTPEMVAAVS
KLMRNQDLIA VSRAITHTSA FRTTIGLPGR LSTRLQPNHP TDDPRGVAAA VLDGLLLGCG
DAVIGVNPAS DSPRHVAELL YLLDEIRQRY RIPTQSCVLT HVTTTIELIG EGVPVDLVFQ
SIAGTEAANR AFGVSLELLA EAHDAGRALR RGTVGNNVMY FETGQGTELS ADSHLGVDGK
PVDQQTLEAR TYAVARAFEP LLVNTVVGFI GPEYLYDAKQ ITRAGLEDHF CGALLGLPMG
VDVCYTNHAV ADQDDMDVLV TLLAAAGCAF VITVPGADDV MLGYQSLSFH DALYVRRLLG
LRPAPEFERW LRELALADER GRVLPTALDS SPLRELVSTL