| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21290 |
|---|
| Symbol | |
|---|
| ID | 8387453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2290344 |
|---|
| End bp | 2291117 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976187 |
|---|
| Product | ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component |
|---|
| Protein accession | YP_003133969 |
|---|
| Protein GI | 257056137 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.426648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCACCG CGGAGAACGT CTCGTTCGCC TACGGCGATA CCGTCGTGCT CGACGGTGCG
CGGATCAAGG TCGGCCGCGG TCGGGTGGTG GGACTGATCG GGCCCAACGG CAGCGGCAAG
ACCACATTCC TGCGCACACT TTACGCCGCG CTCGCTCCCC GGGCGGGCCT CGTCAGCCTC
GACGACACTC CCCTGACCGC GCTGTCCCCG CGGCGGATCG CCAAACGGAT CGCCGTGGTG
GTCCAGGAGA ACTCCACCGA ACTCCCCCTG ACGGTGGCCG AGACAGTCCT TTTGGGACGG
TCTCCGCATC TGACGGCGTT CCAGCGATAC TCCACGCGGG ACCACGAGAT CGCCGCGGCG
GCGCTCACCG AGGTCGGGGC CCGGCATCTG GCCGACCGGA TCTTCGCCGG GCTGTCGGGC
GGGGAGAAGC AGCGGGTGCT CATCGGACGA GCGCTCGCGC AACAGGCGGA TCATCTGCTC
CTGGACGAGC CCACCAACCA TCTCGACATC CGCTACCAGC ACGAGGTGTT GCAGCTGGTG
CGCACTCTCG ACGTGAGCAC GATCGTCGTG CTGCACGACC TCAACCTCGC CGCCCGCTAC
TGTGACGAGG TGGTCCTGCT GGAACGCGGA ACGGTCAGGG CGGTCGGCAC TCCCGACGAG
GTGTTCCGAC CGGAAATCCT CGAACCGATC TACCACATCG GTGTCCAGCG AGTGTTCTCC
GGCGGAGAAC TGCAATTACT GTTCCAGCCG CTCCCCCACC CCGTCGCGAA ATGA
|
|---|
| Protein sequence | MITAENVSFA YGDTVVLDGA RIKVGRGRVV GLIGPNGSGK TTFLRTLYAA LAPRAGLVSL
DDTPLTALSP RRIAKRIAVV VQENSTELPL TVAETVLLGR SPHLTAFQRY STRDHEIAAA
ALTEVGARHL ADRIFAGLSG GEKQRVLIGR ALAQQADHLL LDEPTNHLDI RYQHEVLQLV
RTLDVSTIVV LHDLNLAARY CDEVVLLERG TVRAVGTPDE VFRPEILEPI YHIGVQRVFS
GGELQLLFQP LPHPVAK
|
|---|
| |