Gene Svir_21280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21280 
Symbol 
ID8387452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp2289337 
End bp2290347 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID644976186 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003133968 
Protein GI257056136 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.318454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG TCCACCGACG TTTCCCCGTC CTCACGCCCG CGTTGGCTCT CCTGCTGCTC 
GGCACCGCGT GCGGTGGTCC CGTGGCCACC GGGGAACGTC CGACGGCATC GGCCGGGCAC 
TTTCCGCTGA CCATCACCAA CTGCGGGGTC GACGTCACGT TCGACGGGCC TCCCGAACGG 
ATCATCCTGC TGGAGAGCGC GCCGGTGGCG ACCATGCGGG CGCTCGGGGT CCTGGACTCC 
GTCGTACTAC GGGCAGGTGC GTTCCCACCC GAGTACTACG ACGCCGAGAC CAACGCGGCC 
CTGCGAGCCA TCCCGTCCCT CGGCGAGGAA CTGGACTCGA GTGGGCATCT CCAGATCTCC 
GAGGAAGTGA TCATCGCCCA GCAGCCCGAC CTGGTGCTGG GCCTCCCCGA CGGGGTCACC 
CGCGAAGGGC TCGAGGCGGT GGGCATCAAC GTGTTGGTGC AACCCACGAT GTGCCCGGGC 
GGGGTTGGCG CCACCACGTT CGACGACGTC TACGAACAGA TCAACACCTA TGGCCGTCTT 
TTCGACCGGC AGGACCGGGC GGCGGAGCTG GTGGCTTCGT TACGGCAACG GGTCGCGGCC 
GTCGAGAAGG CCGTCGAGAA GGCCGTGGGC CGGCCGAGGC GCTCGGCCGC CGTGCTGTAT 
CCCACGATCG GTGGAGGCGT CGGTTACGCC TACGGCAACG AGAGCATGGC CCACCCGCAG 
TTGGAATCCG CCGGGTTCAC CAACGTCTAC GCCGACGTCG ACGAGCGGGT GTTCGAGGTG 
ACGCTGGAGG ATGTCCTGGA GCAGGACCCG GACGTGCTGG TGTTGCTCCA CGTCGACGGT 
GACCCGGACG CGGTCAAGGA CGCGGTGGTG AACCTGCCCG GAGCCGATGC GCTCACCGCC 
GTGCGCAACG ACGACATCCT GGTGCAGTTG TTCAACTTCA CCGAACCACC GACACCGTTG 
TCGGTGGACG GGCTGGAGCG GATCCACGAG ACGTTCGGGG CCGACTCGTG A
 
Protein sequence
MRLVHRRFPV LTPALALLLL GTACGGPVAT GERPTASAGH FPLTITNCGV DVTFDGPPER 
IILLESAPVA TMRALGVLDS VVLRAGAFPP EYYDAETNAA LRAIPSLGEE LDSSGHLQIS 
EEVIIAQQPD LVLGLPDGVT REGLEAVGIN VLVQPTMCPG GVGATTFDDV YEQINTYGRL 
FDRQDRAAEL VASLRQRVAA VEKAVEKAVG RPRRSAAVLY PTIGGGVGYA YGNESMAHPQ 
LESAGFTNVY ADVDERVFEV TLEDVLEQDP DVLVLLHVDG DPDAVKDAVV NLPGADALTA 
VRNDDILVQL FNFTEPPTPL SVDGLERIHE TFGADS