| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21270 |
|---|
| Symbol | |
|---|
| ID | 8387451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2288200 |
|---|
| End bp | 2289303 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644976185 |
|---|
| Product | ABC-type Fe3+-siderophore transport system, permease component |
|---|
| Protein accession | YP_003133967 |
|---|
| Protein GI | 257056135 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.709289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.431946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGTCCA CCACGAGGGT CAGCGTCTCC GACGGTCGTC CGGTCGACGA CCTCGGGCGG
ACGATTCGAC GGCGCCACAC CATCTTCTGG CTCAGCGGCC TCAGTCTGGG CCTGGTGCTC
ACGATCGTGC TCGCGGTCGG TGTGGGCGCG GTGAGCGTGC CGCCGTCGAC CGTGTCCCGG
ATCCTCGGCC ATCACCTTCT GGGCGCACCC GCCGAGATGG ATTGGACCCT CGCCCAGGAC
TCCATCATCT GGCAGGTGCG CCTGCCACGA GTCCTGCTCG GCGCCGTGGT CGGTGCCGCG
CTCGCGGTGT GCGGTGTCGC GCTTCAGGCG ATGGTGCGCA ACATGCTCGC CGACCCCTAC
CTACTCGGTG TGACGTCGGG GGCCTCGACC GGCGCGGCGG GGGCGATCCT GTTCGGTTTC
GCGGCCGGAC TGGGGGAGAA CGCCCTGTCC GCGAGCGCCT TCCTGGGAGC GCTCGGCGCA
TCCGTCGTGG TCTTCCTCGT CGCTCGGGCC GGGGGACGGA TCACCTCGCT GCGCTTGTTG
CTGGCGGGGG TCGCCGTCGG CTACGCGCTC TACGCGGCCA CCGGTTTCCT GATCTTCGCC
TCCGGTTCGG CAGAAGGCTC GCGTTCCGTG CTGTTCTGGT TGCTCGGTTC CCTCGGCCTC
GCCCGTTGGG GACTGCCCTT GGCCTTGGTG CTGGTGATCG TGTGCCTCAC CGTGGCGATG
CTCATCGTGT GGGGACGCCG ACTCGACGCC CTCTCGGTCG GCGACGAGAC CGCGCACGCC
CTCGGGATCT CACCGACGGG GTTCCGGGTG CGGCTGCTCG TGGTGGTCTC CCTCTGTGTC
GGGGCCGTGG TGGCCGCCTC CGGCGGCATC GGCTTCGTGG GTCTGGTGAT CCCGCATGTC
GCACGGCGTT TCGTGGGGGC TGCGCACAGC CGGGCGGTTC CGGTGGCCGC GCTGCTCGGC
GCCGTCTTCC TCGTCTGGGC CGACGTCGTG GCGCGCGTGC TGCTGGAACC CCGCGAGTTG
CCCATCGGCA TCATCACCGC CCTCGTCGGC GCCCCGTTCC TGCTGTTGCT CGTTCGACGC
TTCCAAGCGG CGGGCAGCGG ATGA
|
|---|
| Protein sequence | MTSTTRVSVS DGRPVDDLGR TIRRRHTIFW LSGLSLGLVL TIVLAVGVGA VSVPPSTVSR
ILGHHLLGAP AEMDWTLAQD SIIWQVRLPR VLLGAVVGAA LAVCGVALQA MVRNMLADPY
LLGVTSGAST GAAGAILFGF AAGLGENALS ASAFLGALGA SVVVFLVARA GGRITSLRLL
LAGVAVGYAL YAATGFLIFA SGSAEGSRSV LFWLLGSLGL ARWGLPLALV LVIVCLTVAM
LIVWGRRLDA LSVGDETAHA LGISPTGFRV RLLVVVSLCV GAVVAASGGI GFVGLVIPHV
ARRFVGAAHS RAVPVAALLG AVFLVWADVV ARVLLEPREL PIGIITALVG APFLLLLVRR
FQAAGSG
|
|---|
| |