Gene Svir_21260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21260 
Symbol 
ID8387450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2287575 
End bp2288048 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID644976184 
ProductFe2+/Zn2+ uptake regulation protein 
Protein accessionYP_003133966 
Protein GI257056134 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.570442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.920787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG ACGCCCACAC GTCCGAGATG TCACCGGAAG AGGCCATCGA GGCCGCTCTC 
GAGCTGCTGC GGGCCCGTGG ACAGCGGATC ACCGGGGCAC GCAGCGCCGT CATCGAGGCA
CTCGCGCGAC TCGACGACCA TCCGAGCGCG GAACGGCTCT ACGAGCGAGT GCGCGCGCTG
CACCCCACGG TTCACCGGGC CACCGTCTAC CGCACATTGG ACACTCTGAC GGCCCTCGGC
GTGGTGACGC ACGTGCACAC CGGTGGTGGA GCGACCGCCT ACCACCTCGC CCCGCGTGTG
ACCCCCGGGC ACTTGCACGC GCAGTGCCGC GACTGCGACC GGATCGTCGA TCTGCCCGGC
GACCTCCTCG ATCCGATCGT GGACCGACTC TCCCGCGAGG ACGTGTTCGA ACTCCATCCC
ACGCACGTGG CCCTGTCCGG TCGATGCCGG GAATGCCGAG CCGCCGAACG CTGA
 
Protein sequence
MTADAHTSEM SPEEAIEAAL ELLRARGQRI TGARSAVIEA LARLDDHPSA ERLYERVRAL 
HPTVHRATVY RTLDTLTALG VVTHVHTGGG ATAYHLAPRV TPGHLHAQCR DCDRIVDLPG
DLLDPIVDRL SREDVFELHP THVALSGRCR ECRAAER