| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21210 |
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| Symbol | |
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| ID | 8387445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2280094 |
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| End bp | 2281665 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976179 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_003133961 |
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| Protein GI | 257056129 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase
[TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0675992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.523116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGACC CGGCACTAAC CAAGCAGCTC GCCCAACATC TCGAGCTTCT TCGGCAGCCG
GTCGAACTAG TCGCGTCGCT GGACGACAGT GCCAAGTCCG CCCAGCTGAT GGAACTGTTG
ACCGAGGTTG CCGCACTCTC GGAGAAGATC ACGGTGGTAC GCCGTGACGA CGACGAGCGT
CGTCCGTCGT TCGCCATCGT CCGACCGGGA ACCGACATAT CGGTGCGGTT CGCCTGTGTC
CCGCTCGGGC ATGAGCTGAC CTCCTTCGTG CTCGCTCTGC TCCAGGTCGG TGGACATCCC
CCCGCGGTGT CCGAAGAGGT CATCGAGCAG ATCCGGCGGC TGGACGGCGA CTACGAGTTC
GTCACCTACC TGTCACTGTC CTGTCAGAAC TGTCCCGAGG TCGTCCAGGC GCTCAACCTC
ATGAGCGTGG TCAACCCGCG GATCAAGCAC GTGGCCGTCG ACGGTGCCCT GTTCAAGGAC
GAGGTCGAGG CCCGGGGCGT GCTCGCGGTG CCCTCCGTGT TCCTCAACGG TGAACACTTC
GAGCAGGGTC GGATGACCCT TGAGCAAATT CTGAGCAAAC TCGACAGTGG AGCCGCACAG
CGGGCCGCTC AGGAGATCGG CAACAAGGAG CCCTTCGACG TGCTCGTCGT CGGTGCCGGG
CCGGCCGGTG TCTCCTCGGC GATCTACGCC GCCCGCAAGA GTGTCCGCAC CGGGGTCGCC
GCCGGCCGTA TCGGCGGTCA GGTGCTGGAC ACCATGGCGA TCGAGAACTT CATCTCCGTG
CCCTACACCG AGGGGCCGAA GTTCGCCGCC GCGCTCGAAC AGCACGCCTC GGATTACGAG
ATCGACATCA TGGACTCGCA GCAGGCCGTG CGGCTGGAGC CGGCGACACA GCCCGGTGAC
CTGCACACGT TGGTGCTGGA AAACGACGCC ACGCTGAAGG GACGCACCGT CATCCTCGCG
ACCGGCGCCC GCTGGCGTCC CATCGGGGTC CCGGGGGAGC AGGAGTACCG CAACAAGGGT
GTGACCTACT GCCCCCACTG CGACGGCCCC TTGTTCCGCG GCAAGCCGGT CGCGGTGATC
GGTGGTGGCA ATTCCGGAGT CGAGGCCGCC ATCGACCTGG CGGGGATCGT CTCGCACGTG
ACGTTGCTGG AGCTCGGTGA CACGTTGCGA GCCGACGAGG TGCTGCAGCG CAAGCTGCGC
AGCCTGACCA ATGTGGACAT CGTTCTCAAC GCGAAGACCA CCGAGGTCCT CGGCGACGGC
ACCTCGGTAA CGGGCCTTAC CTACACCGAC ACCGAGACAG GCGAGAGCCG ACGGCTCGAC
GTCCAGGGCG TGTTCGTGCA GATCGGCCTG CTGCCGAACA CCGAGTGGCT CGAGGGCGTC
GTCGAGTTGA CCAAGCACAA GGAGATCGTC GTCGACGAGC GGGGCGCGAC CTCCGTGCCG
GGAGTGTTCG CCGCGGGCGA CTGCACGACC GAGCCCTACA AGCAGATCGT GACGGCGATG
GGATCCGGTG CGACCGCCGC CTTGAGCGCG TTCGACTACC TGGTCCGCAC CTCGGCTCCG
ACCGACGACT GA
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| Protein sequence | MLDPALTKQL AQHLELLRQP VELVASLDDS AKSAQLMELL TEVAALSEKI TVVRRDDDER
RPSFAIVRPG TDISVRFACV PLGHELTSFV LALLQVGGHP PAVSEEVIEQ IRRLDGDYEF
VTYLSLSCQN CPEVVQALNL MSVVNPRIKH VAVDGALFKD EVEARGVLAV PSVFLNGEHF
EQGRMTLEQI LSKLDSGAAQ RAAQEIGNKE PFDVLVVGAG PAGVSSAIYA ARKSVRTGVA
AGRIGGQVLD TMAIENFISV PYTEGPKFAA ALEQHASDYE IDIMDSQQAV RLEPATQPGD
LHTLVLENDA TLKGRTVILA TGARWRPIGV PGEQEYRNKG VTYCPHCDGP LFRGKPVAVI
GGGNSGVEAA IDLAGIVSHV TLLELGDTLR ADEVLQRKLR SLTNVDIVLN AKTTEVLGDG
TSVTGLTYTD TETGESRRLD VQGVFVQIGL LPNTEWLEGV VELTKHKEIV VDERGATSVP
GVFAAGDCTT EPYKQIVTAM GSGATAALSA FDYLVRTSAP TDD
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