Gene Svir_21170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21170 
Symbol 
ID8387441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2271866 
End bp2272822 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID644976175 
Productpredicted multicopper oxidase 
Protein accessionYP_003133957 
Protein GI257056125 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.365675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCCG GCGCCGCAGC CGGCATGGCC ACTCCGGTCA TCACCTCGGC CATCGGCGGG 
ACACCGGCAC TGGCAGCCCC GCTCGAGGCC AACGGTTTCC GCGGAAGGCC CCGGCCCCGA
CGCATCACCT TGTTCGCCGA GGAACTTCCG GGTGACATGG TCGGCTATGG ACTCGCACCG
GGTGAAGCCA CCGTCCCCGG ACCGGTCCTG GAGATGTGGG AAGGTGAGAC TCTCGAGATC
CAACTGGTGA ACAACACCGA CCACCGGTTG TCCATCCACC CCCACGGGGT CGAGTACGAC
ACGGAGTCCG ACGGCAGCCC GCTCAACGAC TCCTTCAACG CACCCGGCGA ATGTCGAACC
TATGTATGGC GTAGCCGGAC TCCGTACCGG GCCGAGGACG GCGCTTGGAT GCCGGGCAGC
GCCGGTTACT GGCACTACCA CGACCACGCC ATGGGCACAG ACCATGGAAC GGAGGGACTG
ACCAGGGGAC TTTACGGCGC GTTGGTCGTC CGCCGTCGAG GGGACATCCT GCCGGACCGG
CAGTACACGA TCGTGTTCAA CGGTACGACC ATCAACAACA GGGTGGCTCC GGAGGCCCCC
ATCTTCGAGG CCCGACTCGG CGAGCGGGTC GAGTTCATCG CCATCAGCCA CGGCAACAGC
CCCCACACCT TCCACCTGCA CGGGCACCGC TGGGCGGACA ACCGCACCGG GATGCTCGCC
GGGCCGGACG ACCCGACCCC CACCATCGAC AACAAGGACC TCAATCCGGG CTCCTCCTTC
GGATTCCAGG TCATCGCCGG CAAGGGAGTC GGCCCGGGAG CGTGGATGTA CCACTGCCAC
ATGCAGGTTC ACTCCGACGA CGGGATGACG GGGCTCTTCC TCGTCCGCAA CGAGGACGGC
AGCCTGCCCC CGGGAGCGGA GGAGGCGTTG CGGCGCTACC ACGCCCACTT CAGCTGA
 
Protein sequence
MLAGAAAGMA TPVITSAIGG TPALAAPLEA NGFRGRPRPR RITLFAEELP GDMVGYGLAP 
GEATVPGPVL EMWEGETLEI QLVNNTDHRL SIHPHGVEYD TESDGSPLND SFNAPGECRT
YVWRSRTPYR AEDGAWMPGS AGYWHYHDHA MGTDHGTEGL TRGLYGALVV RRRGDILPDR
QYTIVFNGTT INNRVAPEAP IFEARLGERV EFIAISHGNS PHTFHLHGHR WADNRTGMLA
GPDDPTPTID NKDLNPGSSF GFQVIAGKGV GPGAWMYHCH MQVHSDDGMT GLFLVRNEDG
SLPPGAEEAL RRYHAHFS