| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21130 |
|---|
| Symbol | |
|---|
| ID | 8387437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2265590 |
|---|
| End bp | 2266189 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644976171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133953 |
|---|
| Protein GI | 257056121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.368584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTC TCTCGCCCAA GCCCACCCCG TTACCCGATG AGCTCGACCG GAAGGCCCGC
GGCGCGATGG CGTTGTTCGA TGCCGGGCAT TACTACGCCG CGGAGCGTGC GTGGGCGGCG
CTTCTCGTCG AGTGCGAGCG CGAACTCGGT GCCCAACACC CGGAGTCGAT GGCCACTTTG
GACCGAATGG GATCGGCGTT GTTCCGGCAA CGCCGGTTCG AGGAATCGGC GGAACGGCAC
CGTGAGGCCC ACCGGCGAGC GGTGGAAGTG TTGGGTCCCA AGCATGCGGA CACGTTGCAG
TACGCGCACA ATCTCGGCTG CGCGTTGGCC ATGGCAAACC GTTGGGCCGA AGGGCTGGAG
GTGTTGCGCA GCACCGTGAA GTTGCGGCGG AAAACGCTCG GGGCCACTCA CGCCGATACC
CTCGACACCA CCAAAACACT CGGTGTGTCG CTGTTTATGG CCGGAGACGC CCAAGCGGCG
GCGGAACTGT TGCAGTCGGC TTACCGGACG GCGGCCCGTA CGTTCGGGCT CGATTCCCCG
CTCGTCCAAG ACATCGGCAA CAACCTCGGT ATCGTTCTGC GGAATTCCCC GCGTACCTGA
|
|---|
| Protein sequence | MRFLSPKPTP LPDELDRKAR GAMALFDAGH YYAAERAWAA LLVECERELG AQHPESMATL
DRMGSALFRQ RRFEESAERH REAHRRAVEV LGPKHADTLQ YAHNLGCALA MANRWAEGLE
VLRSTVKLRR KTLGATHADT LDTTKTLGVS LFMAGDAQAA AELLQSAYRT AARTFGLDSP
LVQDIGNNLG IVLRNSPRT
|
|---|
| |