Gene Svir_21070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_21070 
Symbol 
ID8387431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2258634 
End bp2260190 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content69% 
IMG OID644976165 
Producthypothetical protein 
Protein accessionYP_003133947 
Protein GI257056115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0307385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.297952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC TGGGGCAGAC CAGTGATCCC AGGGACCTCA TCCCGGGCGA GCCGGAGGCG 
ATCTCCAACG ACCTGCGGGA ATTGATCGGA ACCCTCACCT CCGTGGACGA GATCGGTGGC
AGTCTCGGCC AGATCGATCC GGTGAGTTGG ATCGGCGAGG CGAGCAACGC GTTCCGTTCC
GCTTTCGGTG ACGAGGTGCC GAAGTGGGCC AAGGCGGTGG AGTGGGCCGG CGACAGTGGG
GAGCTGCTCT GCGACTTCGC CGACGTGCTG AACTGGGGGC AGAGCGAGGC GCAACGCGCG
ATCGAGCTGT ACCACCAGGC GCAGGCCGCG AGCCGCGCCG CCGCAGCGCG GTACGACGCG
CTGATCCAGG CGGGGATACA GATCCTCGCG CCGTTCTGGG ACCCCGGTGA GGCCGCCGCC
CAGGAGGCAC AGGCCATCCT GGACGCCGCA CGGGAACGGG TCGCGCAGGC CGGTGGTGCG
ATCGCCATGG CGTTGGGATT CTCCCCGGAC GGCGAGGGGT TCAAGCGCAC GTTCGGGGAG
ACCGAATGGG GCGCCGAGCA GCGGACGAAA CAACGCCGGT GGGACCCGGA GACGGGCCAG
TGGGTCGAAG AGGACCCCGG TGGCTGGCAA CACAACCGGC ACGGCAGCAG CTACCGGAAC
GAATGGGGCA GCCAGGCCGA CAACCTGCTG CACGACAAAC TCCGCGACGT GCTCGGCAGC
TTCGGGATCG AGATCCCGTT CGCCGAGTTG TTCGGCCTGG AGGAAGGTCG CACGGAGTCG
AACAGCTCCG TGTCCTGGAT GGATGGCAGC CTCTCCGGCG AGTTCGAACA CGGGTCGATC
TCCGGCAAGG GGTCCGCGGA CGCCTCGCTG CTTGGAGCGG GGGCCGGTAC CTATCAAGAA
GTCACCGCTG ACGGGATCGC CGCCGGCGCC AACGCCGAGG CGTACCTGGG CAAGTTCAAC
CTCGACGGCG AGCTGGACCT GGGGAACGGG GTCACCGCGA GTGGTAAGGC CGAAGGGATG
GTCGGCGCTT CCGCCCAGGC CCAGGGTAGT GTGGACGCCT TCGGAGCCCA GGGCAGTGCG
GAGGCCTTCG CCGGTGCTCG TGTCGAGGCG TCCGGTGAGA TGAACTTCGG AGACCACGCC
AGCGTGTCGG CCAGTGGCGA CGCCATGGCC GGAGCGACGG CGTCGGCGGA AGGCAGCATC
GGTTTGACCG GTGTGAACGT CGGAGCCGAG GCCTTCGCCG GGGCGCGAGT CACCGGCGAG
GTCGGTGCCG AGGTGGCCGG TATCGGTGCC GGTGTGAGCG GTGAGGCCTG GGCCGGCGCC
GGGGTCGAGG CCAGCGCCCA GTTCGGCATG GGTGACGATG GGAAGTTCCA TCTGGGTGCC
TCGTTGGGTG TCGGACTCGG CGTCGGTGGC AAGGTCGGCT TCGACGTGAG CGTCGATCCG
GGCGGTGTCG TGGACGCTGT CAGCGATGCC GCCAACGCGG TCGGAGAGGC CGGCAAGGCA
GCGGGCAATG CCATCGGTAA CGCTGCCGAG ACCGTGGGTG ACTGGCTCGG CTTCTAA
 
Protein sequence
MTELGQTSDP RDLIPGEPEA ISNDLRELIG TLTSVDEIGG SLGQIDPVSW IGEASNAFRS 
AFGDEVPKWA KAVEWAGDSG ELLCDFADVL NWGQSEAQRA IELYHQAQAA SRAAAARYDA
LIQAGIQILA PFWDPGEAAA QEAQAILDAA RERVAQAGGA IAMALGFSPD GEGFKRTFGE
TEWGAEQRTK QRRWDPETGQ WVEEDPGGWQ HNRHGSSYRN EWGSQADNLL HDKLRDVLGS
FGIEIPFAEL FGLEEGRTES NSSVSWMDGS LSGEFEHGSI SGKGSADASL LGAGAGTYQE
VTADGIAAGA NAEAYLGKFN LDGELDLGNG VTASGKAEGM VGASAQAQGS VDAFGAQGSA
EAFAGARVEA SGEMNFGDHA SVSASGDAMA GATASAEGSI GLTGVNVGAE AFAGARVTGE
VGAEVAGIGA GVSGEAWAGA GVEASAQFGM GDDGKFHLGA SLGVGLGVGG KVGFDVSVDP
GGVVDAVSDA ANAVGEAGKA AGNAIGNAAE TVGDWLGF