| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20940 |
|---|
| Symbol | |
|---|
| ID | 8387418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2240083 |
|---|
| End bp | 2242203 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976152 |
|---|
| Product | N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| Protein accession | YP_003133934 |
|---|
| Protein GI | 257056102 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.796393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0791884 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AACGTCGCAT CCGCATCGGG ATGGACACCG GAGGAACCTT CACCGACGTC
GTCGCCTTCG ACGAACGCAC GGGGGAACTG GTCACCACCA AATCACCCTC CACACCGGAC
GATCCGGCCG AGGGTTTCAT GGCGGCCATC GACAAGGTCC TCACCGTGCT GGGATTCGCC
GAAGACGACC ACGAAGCCAG AGGCGGCGCG ATCAGCGCGG TCAGCCACGG CACCACGGTG
GCCACGAACC AGTTGCTGGA AGGCAAAGTC GGCGATCTGG GTTTCATCAC CAACGAGGGC
TACGAGGCGG TCCTCGAGAT CGCCCGACAA AGCGTCCCCG ACGGATACGG GAACTCCTAT
TTCTGGGTGA AACCCGACCG GATCGTGCCC CGGGACCTCG TACGGTCCGT GCGCGGCAGG
CTGGATTACA CCGGCGCGGA GATCAGGCCC TTCGACGAGG AGCAGGCCCG TGAGGTCGCC
CGGTGGTTCA AGGCCAAGGG CATCAACGCC CTCGGGGTCT GCTTCCTGCA CGCCTACGCC
AACCCCGCAC ACGAGGAACG CATGCGCGAC ATCATCGCGG AGGAACACCC CGACGCGGTG
GTCTCCATCT CCTCCGAGGT GCTGCGCGAA TACCGCGAGT ACGAACGTTC CATGACCACC
CTGGTCGACG CGGCGGTGAA ACCGCGGCTC TCGCGGTACA TCAACAACAT CAAGTCGAGG
CTGGACGCCT TCGTCGGCTC CGGTCAGGAC ACCGGCGTGC CGCTGTACGT GATGAAGTCG
AACGGTGGCG TGCTCAGCGC CGACGAGGTG GTCCATCAGC CGATCACGAC GGTGCTGTCC
GGACCTGCGG CGGGCGCGCT CGGCGCAGCG TTGATCGCGA AGACCGCGGG CTTCGACAAG
GTGCTCACCT GCGACGGCGG GGGCACGTCG ACGGACGTCT CGGTGGTCGT CGACGGCGAG
CCGAGCCTGA CCACCGAAGG AACCGTCGGC GTGTACCCGT GCAAGATCCC GATGATCGAC
GTGGTGACCG TCGGAGCGGG TGGCGGATCG GTCGCCTGGC TGTCCCCGGA AGGCAACCTC
AAGGTGGGCC CCCGCTCGAT GGGAGCGGAC CCCGGCCCCC TGTGCTACGG CAAGGGCGGC
ACCGAGGTCA CGATCACCGA CGCCCACGTG GTCCTCGGCC GCATCCCACC CCACCTGCTC
GGCGGGGAGA TCCCCCTCGA CGTCGAGGCC GCCCGCAGAG GGATCGACGC ACTGGCGGGC
AAACTGGGTC TTTCCCTGGA ACGATGCGCC ACCGGCGCGC TGGAGATCTC CGCGTGGAAC
CAGGCCAACG CACTGCGGCA GATCACGGTC CAGCGGGGCC TGGACGTACG GGACTTCACC
TTGACCACGT TCGGCGGTTC GGGGTCGCTG CTGCTGTGCC GGTTGATGGA CATCCTCGGG
CTGAGCACCG TCCTCGTCCC GCCCAACCCC GGTAACGTCT CGGCGTTCGG ACTGCTCACC
GTGGACGTGA AGAACGACTA CGTCCGCACG AACGTCTGCC TGCACGACGC GCTCACCCCC
GAGGCGCTCG CGACGGTGTA CGGCGAACTC ACCGAACAGG CCCGAGCCGC GCTGGTGAAG
GAAGGCTTCG CGGAAGAGGA GCACACGTTC GTCCGTGCCG CCGACATCCG GTACTTCGGC
CAGGCCTTCG AGGTGCGGGT CCCCGTGCCG GACGGACCGA TCACCCGGGA ACTCATCGAC
GAGGTGGCCC GCCGGTTCCA CGCCGAGCAC CGAGCCCTGT ACGGCTACGA CTTCGACGGC
GACGACAGTC AACAGGTGGA GTGGGTCAAC CTCCGCGTCG CCGGCATCGG CGAGATCCGA
CGCCCCGAGC TGGTCGCCCA CGACATCCCG GCGGACGTCC CGGCCCCGGA GCCTGCGTCC
CACCGCCCGG TGTGCTTCGA CGCGGGACAG GGCTATGTGG ACACACCGAT CTACTGGCGT
CCCGATCTTT GCCCCGGTCA GGTCCTCCAC GGCCCGGCGA TCGTGGAGGA GTTCGGGGCC
ACGGTGCCGT TGCACCCCGG ATTCACCGCC CGCGTCGACG CCTACCTCAA CATCATCGTG
ACCCGGAAGG AACAGGAATG A
|
|---|
| Protein sequence | MSEQRRIRIG MDTGGTFTDV VAFDERTGEL VTTKSPSTPD DPAEGFMAAI DKVLTVLGFA
EDDHEARGGA ISAVSHGTTV ATNQLLEGKV GDLGFITNEG YEAVLEIARQ SVPDGYGNSY
FWVKPDRIVP RDLVRSVRGR LDYTGAEIRP FDEEQAREVA RWFKAKGINA LGVCFLHAYA
NPAHEERMRD IIAEEHPDAV VSISSEVLRE YREYERSMTT LVDAAVKPRL SRYINNIKSR
LDAFVGSGQD TGVPLYVMKS NGGVLSADEV VHQPITTVLS GPAAGALGAA LIAKTAGFDK
VLTCDGGGTS TDVSVVVDGE PSLTTEGTVG VYPCKIPMID VVTVGAGGGS VAWLSPEGNL
KVGPRSMGAD PGPLCYGKGG TEVTITDAHV VLGRIPPHLL GGEIPLDVEA ARRGIDALAG
KLGLSLERCA TGALEISAWN QANALRQITV QRGLDVRDFT LTTFGGSGSL LLCRLMDILG
LSTVLVPPNP GNVSAFGLLT VDVKNDYVRT NVCLHDALTP EALATVYGEL TEQARAALVK
EGFAEEEHTF VRAADIRYFG QAFEVRVPVP DGPITRELID EVARRFHAEH RALYGYDFDG
DDSQQVEWVN LRVAGIGEIR RPELVAHDIP ADVPAPEPAS HRPVCFDAGQ GYVDTPIYWR
PDLCPGQVLH GPAIVEEFGA TVPLHPGFTA RVDAYLNIIV TRKEQE
|
|---|
| |