Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20920 |
Symbol | |
ID | 8387416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2236824 |
End bp | 2239211 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976150 |
Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
Protein accession | YP_003133932 |
Protein GI | 257056100 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.45811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0207671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAACCA AACTGCTGGG TGAGAGGGTT CGTCGCGTCG AGGACGAACG TCTGGTACGA GGCAAGGGAC AGTACGTCGA CGACCTGCTG CCGGACGCGC TCGAGGTCGC CGTACTGCGA AGTCCGCACG CCCATGCGCG CATCGTGGAC ATCGACGTCG AACCGGTGCT GGACATCGAG GGTGTCGTGG CGGTGTACAC CTATGACGAC CTCACCGGAG CGATGGCCGA TCCCCTGCCG GTGTTGATCC CCCACCCCAC GCTGACCCAT GGCCGCACCC AGTACGCCCT GGCGAAGGAC GAGGTGAACT ACGTCGGCGA GGCGATCGCG ATGGTGGTGG CCGAGAACCG CTACATCGCC GAGGACGCCG TGTCCCGCAT CAGGGTCGAG TACGAGGTCC TCCCCGCGGT GATTGGTGTG GACGCGGCCC GGGCCGCCGA GAACCTGGTC CACGACGACG TGCCCGGCAA CGTGGCCGCC CGGATGGAAC AGTCGGTGGG TGACGCGGAG GCGGCGATCG CAGCGGCACC ACATCGGCTC ACGTTGGACC TGGAGATCGA ACGCAGCGCC TCGATGCCGA TGGAGGGCCG CGGGACCGTG GCCCGCTGGG ACACCGACTC CCGCAGGTTG CAGGTGTGGA CGTCGACCCA GACCTCGACG GGCGTGCGTG CCGCCGTCGC CGCGAAACTG GGCTTGGACC TGGCCCAGAT CGACGTGATC ACCCCGGACG TCGGGGGCGG GTTCGGGGTG AAGATCCTGC ACCCGTGGCC GGAGGAACTC CTGGTGCCGA TGGCCGCGAT GAAGCTGGGC CGCCCGGTGA AGTTCACCGA GGACCGTCGG GAGCACTTCA TCTCCTCGGC GCACGAACGC GGCCAGAAAC ACCACGTGGA GGTCGGTTTC GACGACGACG GTCGGCTGCT CGGACTGTCG GTGCGGTTCT GGCACGACCA CGGCGCCTAC ATCCCGTACG GTCTCATCGT CCCGATCATC ACCTCCACCC AGCTGCTCGG CCCGTACAAA CCGGGCAACT ACAAGGTCGT CTTCGACAGC CTCTACACCA ACACGGTCGT GGTGACGCCG TATCGCGGCG CCGGTCGCCC CCAAGGGGTG TACGTGATGG AGCGGACGAT GGACGCGATC GCGGCCTACC TGGGCAAGGA CCGGACCGAG GTGCGGTCGG TGAACTTCAT CCAGCCCGAC GAGTTCCCCT ACGACCACGG CCTGATCTTC CAGGACGGCA AACCCCTGGT GTACGACTCG GGCAACTTCC CGGCGTCGTT GGAGAAGTTG AAGAAACTCA TCGGCTGGGA CGAGTTCGAG GCGTTCCGGG ACGAGCTACG CGCCCAAGGG CGACGTGTCG GGATCGGCAT GGCCTGCTAT GTCGAAGGCA CGGGTGTGGG GCCGTACGAG GGCGCGCACA TCACCGTCGA GACCAGCGGC AAGGTCAAGG TCGCCATCGG CTTGACCTCT CAGGGCCAAG GGCACGAGAC CGCGTTCGCC CAGATCGTCG CCGACGAACT CGGCGTGCCG TTCGAGGACG TCGAGGTGGT CACCGGGGAC ACGCGCCGCA TGCAGTACGC CGTGGGCACG TTCGCCTCCC GCGCCGCCGT GATGAGCGGG TCGGCGGTGG CGCTGTCCGC ACGCAAGGTG AGGCAGAAGG CGCTGCGCAT CGCCGCCGAG GCGTTGGAGG CGTCGGTGGA CGACCTCGAG ATCCGCGACG GCATGGTGCG GGTGAAGGGC GCACCGAACC AGCAGATGAG CCTGGGCACG GTGGCGGTGC TGTCGAACCC CCTGCGATAC GCCTTCGACG AGGCGTCCCA GGCCGCGACC CAGTTCTCCA TCGGCGATCC CGACAAACCG CCGATCGCAG AAGACGACGA ACCGGGCCTG GAAGGTCGGG ACTTCTACTC CCCGGAGCGA TCCACCTTCG CCAACGGGAT GCACGCCGCC ATCGTGGAGA CCGATCCGGA GACGGCCGAG ATCCGCATCC TCAAGTACGC GGTGGTGCAC GACTGCGGAA CCTTGATCAA CCCGTTGATC GTGGAGGGCC AGATCCACGG TGGTGTCGCA CAGGGTGTCG GCGGCGCCCT GTACGAACGG ATGGTCTACG ACGATTCGGG CCAGCTGTTG AACGCGTCCT TCATGGACTT CCTCCTGCCC TACGTCAGCG AGGTCCCCGA CTCGATCGAG ATCGACCATC TGGAGACCCC GTCCCCGCTG AACCCACTCG GCATCAAAGG TGCCGGTGAG GCCGGGGTGA TCCCGTGCTC GGCGGTGTTC GCCTCCGCCA TCGAGGACGC CGAGGGGTTC CCCATCACGT CGATGCCGAT TTCCCCCTCC GAGCTCTACG AACTTCGGCT TCGTCATGAG AAAGGATCGA CGACATGA
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Protein sequence | MTTKLLGERV RRVEDERLVR GKGQYVDDLL PDALEVAVLR SPHAHARIVD IDVEPVLDIE GVVAVYTYDD LTGAMADPLP VLIPHPTLTH GRTQYALAKD EVNYVGEAIA MVVAENRYIA EDAVSRIRVE YEVLPAVIGV DAARAAENLV HDDVPGNVAA RMEQSVGDAE AAIAAAPHRL TLDLEIERSA SMPMEGRGTV ARWDTDSRRL QVWTSTQTST GVRAAVAAKL GLDLAQIDVI TPDVGGGFGV KILHPWPEEL LVPMAAMKLG RPVKFTEDRR EHFISSAHER GQKHHVEVGF DDDGRLLGLS VRFWHDHGAY IPYGLIVPII TSTQLLGPYK PGNYKVVFDS LYTNTVVVTP YRGAGRPQGV YVMERTMDAI AAYLGKDRTE VRSVNFIQPD EFPYDHGLIF QDGKPLVYDS GNFPASLEKL KKLIGWDEFE AFRDELRAQG RRVGIGMACY VEGTGVGPYE GAHITVETSG KVKVAIGLTS QGQGHETAFA QIVADELGVP FEDVEVVTGD TRRMQYAVGT FASRAAVMSG SAVALSARKV RQKALRIAAE ALEASVDDLE IRDGMVRVKG APNQQMSLGT VAVLSNPLRY AFDEASQAAT QFSIGDPDKP PIAEDDEPGL EGRDFYSPER STFANGMHAA IVETDPETAE IRILKYAVVH DCGTLINPLI VEGQIHGGVA QGVGGALYER MVYDDSGQLL NASFMDFLLP YVSEVPDSIE IDHLETPSPL NPLGIKGAGE AGVIPCSAVF ASAIEDAEGF PITSMPISPS ELYELRLRHE KGSTT
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