| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20870 |
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| Symbol | |
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| ID | 8387411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2230076 |
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| End bp | 2231248 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644976145 |
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| Product | isochorismate synthase family protein |
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| Protein accession | YP_003133927 |
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| Protein GI | 257056095 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.483877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0157067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACCGAG CGGAAGAACT CCTGGGCGCC TACCTGCCCG GGTCGTTCTA CTACTCGTCG
GCACGCGGCT CGTTGTTGGC CGACGGCGTG CATGCGTCGG TGGGCGGGCA GGCCGGTGCG
CGGGCGCAGG CGGCGGCCGA GGCCATGGAC GCCGCGGCCG CGGCGGGTGT GTCCGACCCC
GTGGTGGTCG GCGCGATCGG GTTCCGGCCC GATGACGAGG CGAGCCTGGT CGTTCCCGCC
GTCGTGCGAC GTGCGGCGGC GTCGAACAAC CGAGTGAGTG ACCGGGCCGC GGTGGGATCA
CCCCCGGGTC GATGGTCGGT CACGCCGCGG CCGGAACCGG ACGTCTACGT CGAAACGGTC
CACCGAGCGC TCGCCCGGAT CGCCGAGGGG GAACTGCGGA AGGTGGTGCT CGCGCGTGGT
CTGGAACTGA CCGCGGACGC CCCGATCTCC GTGCCCTCGT TGCTCTCCCG GTTGGTGGTG
TTGAATCCGG ACGCACACGT CTTCGCGGTC GACGTCACCA CCTCGGAGGA CCCGGCGCCG
CGCTCGCTGA TCGGGGCGAG CCCGGAACTG CTCGTCGCAC GACGAGGGGA CACGGTGGTG
GCCAACCCGC TCGCCGGATC GCTGCCGCGC GTCGCCGACG AGGCGGAGAA CCGGCGGCGG
ATCGAGGCGC TGCGTACCTC GGCCAAGGAC CGCGCCGAAC ACGCGTACGT GGCTGATCAG
GTCGCCGGTG TCCTGAGCCG GTTCTGCACC GAGCTGACCG TTCCCGACGG TCCCGACGTG
ATCGGCACCG CCACGATGTG GCACCTGTCG ACCCGGATCA CCGGGCGCAT CGCGAACCCC
ACCGATCCCG CTTTCTCGTC GTTGGCGCTG GCCGAGGCGC TGCATCCCAC CCCGGCGGTG
TGCGGCACCC CGACCGACCT CGCACGGGAC GTGATCAAGG AACTGGAGTC GCAGAACCGG
GGCTACTACG CCGGCCTCGT CGGTTGGACC GACCACCACG GCGACGGCGA GTGGGTCGTC
ACGATCCGCA GCGCCGAGGT GTGCGACCGG ACGATGTGGC TTTCCGCCGG TGCCGGGATC
GTCGAGGGTT CCGATCCCAC CGCCGAACTC ACCGAGACGA GCGCGAAGTT GCGCACCCTG
TTGCGGGCAC TCGGGCTGGA GGACATCGCA TGA
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| Protein sequence | MYRAEELLGA YLPGSFYYSS ARGSLLADGV HASVGGQAGA RAQAAAEAMD AAAAAGVSDP
VVVGAIGFRP DDEASLVVPA VVRRAAASNN RVSDRAAVGS PPGRWSVTPR PEPDVYVETV
HRALARIAEG ELRKVVLARG LELTADAPIS VPSLLSRLVV LNPDAHVFAV DVTTSEDPAP
RSLIGASPEL LVARRGDTVV ANPLAGSLPR VADEAENRRR IEALRTSAKD RAEHAYVADQ
VAGVLSRFCT ELTVPDGPDV IGTATMWHLS TRITGRIANP TDPAFSSLAL AEALHPTPAV
CGTPTDLARD VIKELESQNR GYYAGLVGWT DHHGDGEWVV TIRSAEVCDR TMWLSAGAGI
VEGSDPTAEL TETSAKLRTL LRALGLEDIA
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