Gene Svir_20840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20840 
Symbol 
ID8387408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2227469 
End bp2227756 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content69% 
IMG OID644976142 
Productaryl carrier domain protein 
Protein accessionYP_003133924 
Protein GI257056092 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3433] Aryl carrier domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.630177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00638863 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAACC CCGAGTCCGT GTTGACCCCC GAGCGAATCC GCGCGGACGT CGCGGAACTG 
GTGGGATGCG ACCCGGCGGA GATCGCACCG GACGCCAACC TCTTCGACCT CGGGGTCGAC
TCGGTCCGCA TGATGATGTT GGTCGAGCGG TGGCGTGCCG CAGGGGCGAC CCAGGTGGAG
TTCCCCGACC TGGCCGAGCG GGCGGAGCTC GCTCATTGGA TCGCCGTGCT CACGGGGACG
GACGAGACCA CGACGTCGGG GACGAACACC GAGGGGGAGA GCGCATGA
 
Protein sequence
MSNPESVLTP ERIRADVAEL VGCDPAEIAP DANLFDLGVD SVRMMMLVER WRAAGATQVE 
FPDLAERAEL AHWIAVLTGT DETTTSGTNT EGESA