Gene Svir_20800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20800 
Symbol 
ID8387404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2223401 
End bp2224360 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID644976138 
ProductABC-type enterobactin transport system, permease component 
Protein accessionYP_003133920 
Protein GI257056088 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0161393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCCG CGACGCTGAT CGTGGCGATG GCCGGTTTGG CCCTGCTCGG ATTGTGTTTC 
GGCGCGGTAT GGTCCACTCC GGCGGAGGTG TTCGCCGCGC TGGCCGGCTC GGGCGACTCG
GCGTTGGTGA TCCGGGAATG GCGATTGCCG CGGGTGCTGG CCGGAATGGT CTTCGGCGCG
GCACTGGGGG TGGCCGGGGC CATCTTCCAG AACCTCACCC GCAACCCCAT GGGCAGTCCC
GACGTCATCG GCCTGGACGC GGGTGCCTAC ACCGGTGCCT TGTTCGCGCT GGTCGTGCTG
TCGGGGACGG CGGCCCAGCT GGCGGCGAGT TCGGTCGTGG GCGGCTTGGT GGTGGCGGTG
GTCATCTACC TGTTGTCCAG TGTGGGCGGA CTGTCCGGGC TGCGGCTCGT CGTGATCGGC
ATCGCGGTGA ACGCGATGGT GACCGCGTTG AACTCGTGGA TCGTGCTCCG GGCGGAACTG
GAGGTCGCGA TCGCCGCCGT GGGATGGAGT TCGGGGTCGC TAAACGGGGT CGGTTGGGAG
GACCTGACGG TTCCGTTCAC GGTCATCGCC GTCCTGCTGG CGCTGCTGGC GACTCAGGCG
CAGTCCATTC ACCAGGCCGC GTTGGGTGAT GCCGTCGCGG TGACCACCGG GGTGCGGCTG
GAACGGTTGC GGTTGCTGAT GGTGCTGGTG GGGGTCGGTT GCACGGCCAC CGTGACGGCC
GTGGCCGGAC CGATCGCGTT CATCGCCTTG GCGGCGCCGC AGATCGGACG TCGATTGGCG
AAGGCGCCGG GGATCCCCCT CGTTCCGGCC GCGTTGACCG GAGCGGTGCT GTTGCAGGCG
GCGGATCTGA TCGCCCAGAT GTTGCTGGCC CCCGTCTCAC TTCCGGTGGG GGTGGTGAGT
ACCGCCATCG GTGGGTGCTA TCTCATCTGG CTGCTGACTC AGGAGGTGAA GCGAGCGTGA
 
Protein sequence
MVAATLIVAM AGLALLGLCF GAVWSTPAEV FAALAGSGDS ALVIREWRLP RVLAGMVFGA 
ALGVAGAIFQ NLTRNPMGSP DVIGLDAGAY TGALFALVVL SGTAAQLAAS SVVGGLVVAV
VIYLLSSVGG LSGLRLVVIG IAVNAMVTAL NSWIVLRAEL EVAIAAVGWS SGSLNGVGWE
DLTVPFTVIA VLLALLATQA QSIHQAALGD AVAVTTGVRL ERLRLLMVLV GVGCTATVTA
VAGPIAFIAL AAPQIGRRLA KAPGIPLVPA ALTGAVLLQA ADLIAQMLLA PVSLPVGVVS
TAIGGCYLIW LLTQEVKRA