| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20700 |
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| Symbol | |
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| ID | 8387394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2203170 |
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| End bp | 2204288 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976128 |
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| Product | gentisate 1,2-dioxygenase |
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| Protein accession | YP_003133910 |
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| Protein GI | 257056078 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.280371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.141412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG AACTGGACCA GGCCGTCGAC CACGCCTCGG TCACCAACGA GATGACCCAG
GGCGACAGCC CCGAGTTGAC CCAGCTGTAC CGGGACTTCG ACGCCCACCA TCTCATTCCG
CTGTGGACGC AGATCGGCGA CCTGATGCCG ATGCACCCCA AGCCCGAGGC CGTGGCGCAC
GTGTGGAAGT GGTCCACGTT GTATCCGCTG GCGCAGCGGG CGGGAGACCT CGTCCCGGTC
GGACGGGGCG GCGAACGGCG GGCGATCGCG TTGGCCAACC CCGGCCTGCC CGGCTCCGCG
TACGCCACCC CCACGCTGTG GGCGGCGATC CAGTACCTCG GTCCCAAGGA GACCGCACCC
GAGCATCGGC ACTCGCAGAA CGCGTTCCGT TTCGTCCTCG AGGGCGAGGG GGTGTGGACG
GTCGTCGACG GTGACCCCGT GCGGATGTCC CGTGGTGACT TCCTGCTGAC CCCCGGATGG
CGCTTCCACG GCCACCACAA CGAGACGGAC CAGCCGATGG CGTGGCTCGA CGGGTTGGAC
ATCCCGTTCT CCTACTACAC CGACGTCGGG TTCTTCGAAT TCGGCGCCGA CCGTGTCACC
GACTACGCCA CGCCCAACTA CTCCCGTAGT GAACGACTGT GGTGCCACCC CGGGCTGCGC
CCGCTGTCGG GGCTGCAGAA CACGGTGTCC TCGCCGATCG GGGCGTACCG GTGGGAGCAC
ACCGACGCCG CGTTGACCGA ACAGCTGCTG TTGGAGGACG AGGGCCAGCC CGCCACCGTC
GAACAGGGAC ACGCCGCCGT CCGCTACATC AACCCCACCA CCGGTGGCGA TGTCATGCCG
ACGATCCGCG CCGAGTTCCA CCGGCTGCGG GCCGGGGCGG CGACACCCGC CCGGCGCGAG
GTGGGCTCCA GCGTGTTCCA GGTGTTCGAA GGCCGCGGCC AGGTCGTGCT CGACGGTGTC
GAGCATCCGC TGGAGAAGGG TGACCTGTTC GTGGTGCCCT CGTGGGTGCC GTGGTCGTTG
CAGGCCGAGG AGCAGTTCGA CCTGTTCCGT TTCTCCGACG CCCCGATCAT GGAGCGTCTG
CACTTCAACC GTGTTCACGT CGAAGGAGAG CAGCGATGA
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| Protein sequence | MSDELDQAVD HASVTNEMTQ GDSPELTQLY RDFDAHHLIP LWTQIGDLMP MHPKPEAVAH
VWKWSTLYPL AQRAGDLVPV GRGGERRAIA LANPGLPGSA YATPTLWAAI QYLGPKETAP
EHRHSQNAFR FVLEGEGVWT VVDGDPVRMS RGDFLLTPGW RFHGHHNETD QPMAWLDGLD
IPFSYYTDVG FFEFGADRVT DYATPNYSRS ERLWCHPGLR PLSGLQNTVS SPIGAYRWEH
TDAALTEQLL LEDEGQPATV EQGHAAVRYI NPTTGGDVMP TIRAEFHRLR AGAATPARRE
VGSSVFQVFE GRGQVVLDGV EHPLEKGDLF VVPSWVPWSL QAEEQFDLFR FSDAPIMERL
HFNRVHVEGE QR
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