| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20620 |
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| Symbol | |
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| ID | 8387387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2196943 |
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| End bp | 2197788 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976121 |
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| Product | Helix-turn-helix protein |
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| Protein accession | YP_003133903 |
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| Protein GI | 257056071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0588198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.440077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTA CCACACCGAA GGCGCGGGCA CTCGGCGTCG AACTGCGTAA GGCTCGCGAA
GCTGCGGGGT ACAGCGTCAG ACAGTTCGCC GCCATGCTCG ACACCTCACA CGCGACGATC
TCGCGGTGGG AAACCGGGCA GCGCACACCC ACGCCAGAGG ACGTCGCCGC CTACCTCGCC
AAAGCGGGCG TGTCCGCAGT GACGCGGCAG CAGCTCGTGG ACCTCGCTCG CGACGCCGAT
GGGCCGCACT GGCTGTCCGT TGGCATGCCC GAGCAGCAGC GACAACTGGC TGGGCTGCTC
GAAGTGGAGC GCACAGCGAA CCGTATCACC ACCGTGTCCA CGCTGCTGAT TCCCGGACTG
CTCCAGACCG GCGACTACGC GAGAGCGATC ATGCGTGCGG CCGATGTGCC CGCGAGCGAA
ATCGACACCC GCGTGGCGGT TCGACTCGGC CGCCGGGATG CGATCACCCG CCGCAACCCC
GCGCAGCTCG TGGCTTTCGT CGCCGAGTCC GTGCTGCACG CGGAGATCGG CGGTCCTGCG
GTGATGCTCG ACCAGCTCCA TGCGCTGTTG GAACATGCGG AGCGGCCCAA CGTGGAGTTG
CGCGTGATTC CCACGAAAAC GGACTGGCAT CCGGGCCTTG ACGGTCCGTT CAGTTTGGTC
GAGGCATCTG ACCGTGCCCC CGTGGTGCAC CTCGAAAACC GCATCAGTGG CTTGTTCTTA
CATGAGCCCG CCGAGGTTGA GATCTACCGC GTCGCGGTGA ATAGGGTGAG CGAGGTGGCG
ATGAGCGCCA AGGATTCTGC GACGCTCATC GCCGACGTCA TCAACAGCAG GGAGACTACA
GAATGA
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| Protein sequence | MAGTTPKARA LGVELRKARE AAGYSVRQFA AMLDTSHATI SRWETGQRTP TPEDVAAYLA
KAGVSAVTRQ QLVDLARDAD GPHWLSVGMP EQQRQLAGLL EVERTANRIT TVSTLLIPGL
LQTGDYARAI MRAADVPASE IDTRVAVRLG RRDAITRRNP AQLVAFVAES VLHAEIGGPA
VMLDQLHALL EHAERPNVEL RVIPTKTDWH PGLDGPFSLV EASDRAPVVH LENRISGLFL
HEPAEVEIYR VAVNRVSEVA MSAKDSATLI ADVINSRETT E
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