Gene Svir_20560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20560 
Symbol 
ID8387382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2193434 
End bp2193634 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content59% 
IMG OID644976116 
Productprotein of unknown function (DUF397) 
Protein accessionYP_003133898 
Protein GI257056066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.715891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC AGCGCGAAGA CAACGGTTGG CGCAAGTCCA GCTTCTCCGG TAAGGAGACC 
AACTGCGTGG AGTTCCGTCG CGTCGAGGGC GGTGTGGAGG TGCGCAACAG CAAGCGGCCT
AACGACGCGA TTATCCGCTA TACCGATAGC GAATGGAGAG CATTCGTCGC CGGTGTGAAG
GCGGGCGAAT TCGACATCTG A
 
Protein sequence
MTVQREDNGW RKSSFSGKET NCVEFRRVEG GVEVRNSKRP NDAIIRYTDS EWRAFVAGVK 
AGEFDI