Gene Svir_20440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20440 
Symbol 
ID8387371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2181361 
End bp2181852 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID644976106 
Producthypothetical protein 
Protein accessionYP_003133888 
Protein GI257056056 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.565275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACCCG ATGCGGCGAC CCGAGACCGG AAATACGCTG AAAGCACCGC CAACCCACAC 
GGCAAAGGAG CGCGTAGTGG TCTCTCGGCT CAACCCCTAT ATCTCAGTTT CCCCGGCAAC
GCGCGGCAGG CGATGGAGTT CTACCGCGAC GGCTTCGGTG GGAACCTGTC CATGGCCACC
TTCGGCGACT TCGACATGCA GGACACCCCC GACGCCGACA AGATCATGCA CAGCGCGTTG
GAGACCGACC TCGGGTTCAC CCTCATGGGA GCCGATGTGC CCTCGGACCA GGAATACAAG
CCCGGCAACA ACATCGGGGT GAGCGTCAGC GGCGACGACG CGGAAGCACT CCGTGACTAC
TGGGCGAGAC TCTCCGAGGG AGGCACCGTC GTGGTGCCGA TGGAAAGACA GCTGTGGGGC
GACGAATTCG GCATGTGCGT CGACCGGTTC GGTGTCGAGT GGATGGTCGA CATCGGCAGT
CCACAGGGGT AG
 
Protein sequence
MRPDAATRDR KYAESTANPH GKGARSGLSA QPLYLSFPGN ARQAMEFYRD GFGGNLSMAT 
FGDFDMQDTP DADKIMHSAL ETDLGFTLMG ADVPSDQEYK PGNNIGVSVS GDDAEALRDY
WARLSEGGTV VVPMERQLWG DEFGMCVDRF GVEWMVDIGS PQG