Gene Svir_20420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20420 
Symbol 
ID8387369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2179340 
End bp2179762 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content71% 
IMG OID644976104 
ProductFe2+/Zn2+ uptake regulation protein 
Protein accessionYP_003133886 
Protein GI257056054 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.375668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCT CCCACCACGA CCTGTTGCGC CAGGCGGGGC TGCGGGTGAC CGCGCCCCGT 
CTGGCCGTAC TCGCCGAGGT CGAAGCCGCT CCCCACTCCG ATGCGGACAC CATCCGCAAC
GGCGTGTCCG ATCGGTTGGG GGCGGTGTCG ACCCAGGCGG TGTACGACAT CCTGCGCGCG
CTCACCGACG CCGGGATCCT CCGGCGCACC GAGCCCGCGG GGTCACCGAG TCGGTACGAG
GTCGCCCGGG GCGACAACCA CCACCACCTG GTCTGCCGTG CGTGTGGGGA GGTCGTCGAC
GTGCCGTGCG CCATCGGGGA GGCGCCGTGT CTGCACGCCA GCGTCGACCA CGGCTTCCTC
GTTGACACCG CCGAGGTCAT CTACTGGGGC TACTGCCCCG ACTGTCTGTC CGAATCCGCC
TGA
 
Protein sequence
MPTSHHDLLR QAGLRVTAPR LAVLAEVEAA PHSDADTIRN GVSDRLGAVS TQAVYDILRA 
LTDAGILRRT EPAGSPSRYE VARGDNHHHL VCRACGEVVD VPCAIGEAPC LHASVDHGFL
VDTAEVIYWG YCPDCLSESA