| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20360 |
|---|
| Symbol | |
|---|
| ID | 8387363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2172981 |
|---|
| End bp | 2173751 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644976098 |
|---|
| Product | sporulation control protein |
|---|
| Protein accession | YP_003133880 |
|---|
| Protein GI | 257056048 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4326] Sporulation control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0585813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAC GGTTACTCAG CGCCTTCGGT GTCGGGGGCC CGTCCGTCGA CACGGTGCTG
GATAACCCAC ACGTCCTGCC GGGACAGGTG ATCACCGGGC AGGTGCGCAT TCAGGGCGGC
AGCTACGACG CGGAGATCGG TGAGGTCGCG CTGTCCTTGG TGACCCGCGT CGAGATGGAG
ACCGGCGACC ACGAGTTCAC CGGCACGGCC GAGTTCTTCC GCGTGGTGGC ACAGCAAGGC
GTGTGGGTGC CCGCCGAGCA GTTCGTCGTC GTCCCCTTCC AGATCATGGT GCCCTGGGAG
ACACCGATCA CCGCGGTGGG CGACCGGGTG TTGCCGGGCA TGACCGTGGG GGTGTGCACC
GATCTGGTCA TCGCCGGTGC CCCCGACAAG GGTGATCTCG ACCCGGTGTA CGTCCACCCG
TTGCCGTCGC AGAACGCGGT GCTCGACGCG TTCGGCAGGC TGGGCTTCGA ATTCCGCAGC
GCCGACGTCG AAATGGGACA GTTGCGTGGG GTTCCGCAAC AACTGCGGTT CTTCCAGGAA
CTGGAGTTCT ACCCGCCCCA AGCCTTCTTC GGACGGATCA ACGAGGTGGA ACTCACGTTC
GTCGCCAACG CGCACGAGCT CCACATCGTG TTGGAGGCCG ACAAGCGCGG CGGCCTGTTC
CGCGAGGGCC AGGACGTCTA CGGCCGGTTC TCGACCTCGC ACGCCGAGGC CCAGCACCGC
AACTGGGACG AGCTCATCCA CAACTGGCTG GTGCAGACGG CCTCCCGGTA G
|
|---|
| Protein sequence | MFQRLLSAFG VGGPSVDTVL DNPHVLPGQV ITGQVRIQGG SYDAEIGEVA LSLVTRVEME
TGDHEFTGTA EFFRVVAQQG VWVPAEQFVV VPFQIMVPWE TPITAVGDRV LPGMTVGVCT
DLVIAGAPDK GDLDPVYVHP LPSQNAVLDA FGRLGFEFRS ADVEMGQLRG VPQQLRFFQE
LEFYPPQAFF GRINEVELTF VANAHELHIV LEADKRGGLF REGQDVYGRF STSHAEAQHR
NWDELIHNWL VQTASR
|
|---|
| |