| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20330 |
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| Symbol | |
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| ID | 8387360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2167558 |
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| End bp | 2169225 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976095 |
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| Product | phosphodiesterase/alkaline phosphatase D |
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| Protein accession | YP_003133877 |
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| Protein GI | 257056045 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.616637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCA CCTCGCCTTG CGACGACCGT CCTCTTCGAC CTGAGCCCCC TGCGCTGACC
CGACGCCAGG TCCTGCGCAC CGGTGGTGCG CTCACGGCGG CCGCCGGCGT CGGGATGGTC
GCCACCCCCA CCGCCACGGC CGAACCCGAC CCGTTCGCCC ACGGTGTCGC CTCCGGCGAC
CCGCTCCCCG ACGGGGTGCT GCTGTGGACC CGAGTGACGC CCACGCCGGA GGCGCAACCC
GGATCAGGCC GTGGCCCCGA GGTCACCGTG AGCTGGGAGG TGGCCCCGGA CGAGACGTTC
ACCGCCGTGG TCGCCCACGG CAGCGTCCGC ACCGGCCCCC AACGGGACCA CACCGTGAAG
GTCGACGTCA CCGACCTCGC CCCCGACACC TGGTACTGGT ACCGCTTCCG CTACGGCGAC
GCCGTCTCGC CTGTGGGACG CACCCGCACC GCACCCGCCG CGGACGCCGC GGTCACGCGT
CTGCGCATGG GCGTGGTCTC CTGCTCGAAC TGGCAGGCGG GGCACTTCGC CGCCTACCGG
CAGCTGGCCG ACCGTGACGA CCTCGATCTG GTCCTCCACC TCGGCGACTA TCTCTACGAA
TACGGCGTCC CCTCGGACGG CAGCGCGGTC CGGGAACACG ACCCCGCCGT GGAGATGATC
ACGCTCGCGG ACTATCGGCG TCGGCACGCG CAGTACAAAA CCGATCCGCA CCTGGCCGCC
CTGCACGCAC GAGTGCCGTT CGTGGCGACC TGGGACGACC ATGAGTCCGC CAACAACGCC
TGGTCGGGAG GCGCGGAGAA CCACACCGAG CCCGACGAGG GGACCTGGGC CGAGCGGCGT
GCCGCCTCCC AACAGGCCTA CGCCGAATGG ATGCCCGTCC GCTACGAACC CGGCGGTCGA
CTCTACCGAC GGTTCGGTTT CGGCACGCTG GCGGAGCTGT CCATGCTCGA CCTGCGCACC
TACCGCAGCA AGCAGGTGGC CCACCCGTTC GACCGGGACC AGCACGACCC GGAACGCACC
ATCGCGGGTG AGGAACAACT GCGTTGGCTC ATCGACGGCC TGGTGACCTC CTCGGCGCAG
TGGAAACTCA TCGGCAACTC GGTGATGATC GCGCCGGTAC GTTTCCCCTC CACCCTGTCG
ACCCGCGAAC TCCACGCGCT CACCGGGTTG ATCGGGCCCA TCGAAGGCAT CCCGTACAAC
GTGGACCAAT GGGACGGCTA CACCGCCGAC CGTGCGACCG TGTTCTCGGC ACTGCGCGAC
CACGGAATCC AGGACACCGT GTTCCTGACC GGGGACATCC ATTCCGGCTG GGCGTGCGAG
CTGCCCGCCA ACCCGCTCAC CTACCCCCTC AACCGCAACT CCGTGGGCGT GGAACTGGTC
TGCACCTCGG TGACCAGCGA CAACCTCGAC GACATCCTCG GTGTGCGGCC ACGGACCCTC
TCCTTGGCCG TCGAGGCCGC CATCAAGGTG AGCAACCCGC ACGTGAAGTA CCTCGACTTC
GACTCACACG GCTACTCGGT GCTGGAGGTC TCGCCGAGCG CGGTGCACAT GGACTGGTAC
GCCCTCGACG ACCGCACCGA CCCGGAGAGC TCGGCCCGCC GCGTCATGTC CTACCGGGTG
GCGGCCGGCA CCCAGCGAGT GACGCGCACC GAGGAGGTCC TGCGGTGA
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| Protein sequence | MNATSPCDDR PLRPEPPALT RRQVLRTGGA LTAAAGVGMV ATPTATAEPD PFAHGVASGD
PLPDGVLLWT RVTPTPEAQP GSGRGPEVTV SWEVAPDETF TAVVAHGSVR TGPQRDHTVK
VDVTDLAPDT WYWYRFRYGD AVSPVGRTRT APAADAAVTR LRMGVVSCSN WQAGHFAAYR
QLADRDDLDL VLHLGDYLYE YGVPSDGSAV REHDPAVEMI TLADYRRRHA QYKTDPHLAA
LHARVPFVAT WDDHESANNA WSGGAENHTE PDEGTWAERR AASQQAYAEW MPVRYEPGGR
LYRRFGFGTL AELSMLDLRT YRSKQVAHPF DRDQHDPERT IAGEEQLRWL IDGLVTSSAQ
WKLIGNSVMI APVRFPSTLS TRELHALTGL IGPIEGIPYN VDQWDGYTAD RATVFSALRD
HGIQDTVFLT GDIHSGWACE LPANPLTYPL NRNSVGVELV CTSVTSDNLD DILGVRPRTL
SLAVEAAIKV SNPHVKYLDF DSHGYSVLEV SPSAVHMDWY ALDDRTDPES SARRVMSYRV
AAGTQRVTRT EEVLR
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