| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20320 |
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| Symbol | |
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| ID | 8387359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2166278 |
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| End bp | 2167561 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976094 |
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| Product | uncharacterized AP superfamily protein |
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| Protein accession | YP_003133876 |
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| Protein GI | 257056044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.291938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACC ACGCCACCGG AGTGAGCCGC CGGCGATTCC TGCGTGTGGC CACGGGTACC
TCGGCCGCGG TCGTACTGTC CACTCTGGCC CCGACCGCCT TCGCCGCGGT CCGTCCCCGA
GTCCGCGTGT ACGTGCTCGT GGTGGACGGC CTCCGGCCTG ACGAGATCAC CCCGGCGATC
ACACCGACGC TGTATCGGCT GCGGGAGGAG GGCACGACGT TCCCGGCGGC GCGGTCGCTG
CCGGTGACGG AGACACTGCC CAACCACGCC ATGATGATCA CCGGGATGCG TCCGGATCGG
ACCGGTGTCC CGGCGAACTC GGTCTACGAC CCGGACCTCG GCAAGGTGCG CACACTCGAT
GCGGCTGAGG ACCTGCGCGC GCCCACGCTG CTGGAACGGC TGCGGGAGAG GGGCCTGATC
ACGGCGAGCG TGCTCAGCAA GGAGTACCTG TACGGGATCG TCGGCGAACG GGCCACCGTG
CGCTGGGAAC CGTTTCCCGT CATCCCGATC AGCGACCACG CGCCCGATTT CGCCACCGTC
ACCGCGCTCA TGGCCACGGT GTCCAAAACC GACCCGGACT TCGTGTTCAC GAACCTCGGG
GACGTGGACA GGCTGGGCCA TGCCGACCTG ACGGGCACGA CACTGCGCGC CGCCCGCACC
GCCGCGCTCC GGTCCACCGA TACGCAACTG GCCCGATTCG TGGCGTTCCT CAAACGCACA
CACCGGTGGG ACACGAGCGT GCTGCTCGTC CTCGCCGACC ATTCGATGGA CTGGTCGATG
ACCCACCGCG TGATCTCGTT GACGCCGGTG CTGGAAGCCG ACCCGTTCCT GGCGGGACGG
GTGGCGATCG CGCAGAACGG CGGAGCCGAC CTGTTGACCT TCACCGGTGC CGACAGCGAA
CGCGTGGACG CCGTCGACCG GATGCGCGAG CTCGTCCGGG GGGTCGACGG CGTGCTGTCG
GTGCACACGC CCGACGAACT GCGACTCGGA CCGCGCGCGG GGGACCTCGT CGCGTACTGC
CGGGCGGGAT GGCGGTTCAC CGACCCGAAA CCGTGGTCGA ACCCGATCCC GGGCAACCAC
GGACACCCGG CCACCGAACC GATCCCGTTC TTCGTCTCGG GAGGCCATCC GGCCGTGCGC
ACCCGAAACG CCTCGTCGGC TGCCGCGACC ACGGTCGACG TGGCGCCCAC CGTGGGAGCC
CTGTTCGGGC TGTCCGACCC CGAGGGCGGT TACGACGGCG AGATACGACA CGAGGCGTTC
GACACCGCCT CCCCGCCGGT GTAG
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| Protein sequence | MNDHATGVSR RRFLRVATGT SAAVVLSTLA PTAFAAVRPR VRVYVLVVDG LRPDEITPAI
TPTLYRLREE GTTFPAARSL PVTETLPNHA MMITGMRPDR TGVPANSVYD PDLGKVRTLD
AAEDLRAPTL LERLRERGLI TASVLSKEYL YGIVGERATV RWEPFPVIPI SDHAPDFATV
TALMATVSKT DPDFVFTNLG DVDRLGHADL TGTTLRAART AALRSTDTQL ARFVAFLKRT
HRWDTSVLLV LADHSMDWSM THRVISLTPV LEADPFLAGR VAIAQNGGAD LLTFTGADSE
RVDAVDRMRE LVRGVDGVLS VHTPDELRLG PRAGDLVAYC RAGWRFTDPK PWSNPIPGNH
GHPATEPIPF FVSGGHPAVR TRNASSAAAT TVDVAPTVGA LFGLSDPEGG YDGEIRHEAF
DTASPPV
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