| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20290 |
|---|
| Symbol | |
|---|
| ID | 8387356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2163100 |
|---|
| End bp | 2163654 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644976091 |
|---|
| Product | predicted flavoprotein |
|---|
| Protein accession | YP_003133873 |
|---|
| Protein GI | 257056041 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.690539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC GCATCCTCGC GCTCGTCGGC AGCCTCAGGG CGGGTTCGCA CAACCGGCAA
CTCGCCGAAG CGGCCGCCCG ACACGCCCCC GAGGGCGTCC ACATCGACAT CTACGACGGA
CTCGCCGAAC TGCCGTTCTA CAACGAGGAC ATCGACACCG CCGATGCCGT CCCCTCGGCC
GCCACCCGAC TGCGCGAGGC CGTCGCAGCG GCCGATGCCG TCCTCCTGTT CTCCCCCGAG
TACAACGGCA CCCTGCCCGC GGTGTTGAAG AACGCCATCG ACTGGCTCTC CCGCCCGTAC
GGCGCGGGCG CCTTGCAGAA CAAGCCCACG GCCGTGGTGG GCACCGCGCT CGGACAATAC
GGCGGTGTCT GGGCTCAGGA CGAAGCCCGC AAGGCCGTGG GTATCGCGGG CGCGAAGGTC
GTCGACACGA CCAAGCTGGC GATTCCCCAC TCGGCGACCC GCTTCGCCGA GACCCATCCG
CAGGAGGACA CCGAGGTCGT CGAAGGCCTG CACAAGGTGC TCGACGAACT CACCGCGAAC
GTGCCGGCTG CCTGA
|
|---|
| Protein sequence | MTVRILALVG SLRAGSHNRQ LAEAAARHAP EGVHIDIYDG LAELPFYNED IDTADAVPSA
ATRLREAVAA ADAVLLFSPE YNGTLPAVLK NAIDWLSRPY GAGALQNKPT AVVGTALGQY
GGVWAQDEAR KAVGIAGAKV VDTTKLAIPH SATRFAETHP QEDTEVVEGL HKVLDELTAN
VPAA
|
|---|
| |