| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20180 |
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| Symbol | |
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| ID | 8387345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2149858 |
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| End bp | 2152005 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976081 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_003133863 |
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| Protein GI | 257056031 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0209994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0622717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCCG CACGGCCAGC CCTGCGGCGG GCACACCCGT CGTCGTTCAC AGCGACCACG
CCGAGGAGGT CCGGCATGGC GGTGACTCTC GTCCACGGAA CGTCGTTCTG CGTATGTGAT
GACGACGGCG AGTTCGGCGG AGCCCTCGCG GAGGGCACCT TCTACCAGGA CACCCGCATT
CTCTCCGGAT GGAACCTCCG GTTCGACGGC AAACCCGTCG AACCCATCAC GGTGCAGATC
CCCGAACCCT TCCAAGCACG TTTCGTCGGC CGAGCCCACT CCAGCGAGGG GGAAGGCGAA
AGCTCACTGC TGGTACGCCG GGAGCGCTAC GTCGGCGGTG GTATGCGCGA GGACCTCATC
CTGCGCAACT ACGGCCGCAC CCGGGTCGCC TGCACGGTCA GTTTCCGGGT CGCGGCCGAC
TTCGCCGACG TCTTCGAGGT CAAAGCCGGC CGTATCCGCG ACAAGGGCCA CCACGCCGTC
GAGGTCACCA GCAGCGGTCT CTACCTCGCC CGTTACCTCG ACTCCACCAG TAGAGGCGTA
CGCATCACCG GAGTGACCCT CGACGGCAAA CACGCCAAGT ACTCCCGCGA CCGCGTCAGT
TTCCGCGTCG TCGTCCCACC CGGCGAGGAG TGGTACGCCT CCGTGACCGC CCTCCCCCTC
ATCGACGGCA CCCCCATCAC CCCGCTGTTT CCCAGGGAAC GTCCCGTCGA GTTGTCCGGC
CCCGCCATCC TCACCCGCCG TTGGCGTGAG GAGAGCCCGG TGCTGAGCTA TTCCGAAAAC
CGCACACTCG CCACCACCCT GCAACGCAGC AGGGAAGACC TGGGGGCGCT GCGCATGTTC
GACCCCGAAC ATCCCGACGA CGTCGGTATC GCGGCGGGCG CACCGTGGTT CATGGCGCTG
TTCGGCCGTG ACTCGCTGAT CGCCTCCCTG ATGTCGCTGG CCGTGGACCC CACACTCGCG
CTCGGCACCG TGCAGACACT CGCCCGGCAC CAGGGCACCA CCGTCGAACC CAACAGCGAG
GAGGAACCCG GACGCATCCT CCACGAGGTG CGGTTCGGCG CCGATGTCTC CCTCGCCCTG
GGCGGTAGCC ACATCTACTA CGGCAGTATC GACGCCACCC CGTTGTTCGT CATGTTGCTC
GGCGAACTCA GCCGTTGGGG CATCGGCAAA GACCGGGTCG AGGCGTTGCT CGGACACGCC
GACCGCGCGC TGGAGTGGAT CGACCGCTAC GGTGACCGGG ACGGCGACGG CTTCGTGGAA
TACCACCGCG CCACCGACAG GGGCCTGGCC AACCAAGGCT GGAAGGATTC GTGGGACGGC
ATCAACTTCG CCGACGGGAC CATCGCCCAC TCCCCCATCG CGTTGTGCGA GGTGCAGGGC
TATGTCTACG CGGCGTTCGT GGCCCGAGCC GAACTCGCCG AAAGTTTCGG CGATCATGAA
GGCAACAGGT ACTGGCGATC CCGTGCCGCG GACTTGAAGC GACGGTTCAA CGAACGGTTC
TGGTTGCCCG AGCTCGGCCG CTACGCCCTC GGATTCGACG GCGAGAAACG ACCGATCGAC
TCCGTGACGT CCAATATCGG GCACTGCCTG TGGACGGGGA TCATCGACGA CGAACGCGCC
GCCCTTGTCG CGGACTCCCT GCTGTCCCCC GAGATGTTCA CCGGCTGGGG GATCCGCACC
CTCTCGACGG CCATGGGTGC CTACAACCCC ATGAGCTACC ACAACGGCTC CGTGTGGCCG
CACGACAACG CGATCATCGT CGCAGGACTC ATGCGTTACG GCTTCGTGAA GCACGCGCAG
CGTGTCGCCG TCGCCGTACT CGACGCCGCC GCCGCGTTCG ACGGCAGGCT TCCCGAATTG
ATGTGCGGTT TCGACCGGTC GGAATACAGC ACCCCCGTCC CCTATCCCAC CTCCTGCTCC
CCGCAGGCAT GGGCTTCCGC GGCACCGATC CACCTGTTGC GGAGCCTGCT GCGTTTCCAA
CCGTCACTGC CCCATCGGCG CCTCCGCATA TCCCCAGCGT TACCGAAGTC CTTCGGAGCG
TTACAGATCG ACGACGTTCC CCTCGGAGGG AGCCGGATTT CCATCCAGGC AAAGGAAACC
AAGGTGCGGG TCGGACACCT GCCGACGGAC ATCGAATTGA TTCATTAG
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| Protein sequence | MPAARPALRR AHPSSFTATT PRRSGMAVTL VHGTSFCVCD DDGEFGGALA EGTFYQDTRI
LSGWNLRFDG KPVEPITVQI PEPFQARFVG RAHSSEGEGE SSLLVRRERY VGGGMREDLI
LRNYGRTRVA CTVSFRVAAD FADVFEVKAG RIRDKGHHAV EVTSSGLYLA RYLDSTSRGV
RITGVTLDGK HAKYSRDRVS FRVVVPPGEE WYASVTALPL IDGTPITPLF PRERPVELSG
PAILTRRWRE ESPVLSYSEN RTLATTLQRS REDLGALRMF DPEHPDDVGI AAGAPWFMAL
FGRDSLIASL MSLAVDPTLA LGTVQTLARH QGTTVEPNSE EEPGRILHEV RFGADVSLAL
GGSHIYYGSI DATPLFVMLL GELSRWGIGK DRVEALLGHA DRALEWIDRY GDRDGDGFVE
YHRATDRGLA NQGWKDSWDG INFADGTIAH SPIALCEVQG YVYAAFVARA ELAESFGDHE
GNRYWRSRAA DLKRRFNERF WLPELGRYAL GFDGEKRPID SVTSNIGHCL WTGIIDDERA
ALVADSLLSP EMFTGWGIRT LSTAMGAYNP MSYHNGSVWP HDNAIIVAGL MRYGFVKHAQ
RVAVAVLDAA AAFDGRLPEL MCGFDRSEYS TPVPYPTSCS PQAWASAAPI HLLRSLLRFQ
PSLPHRRLRI SPALPKSFGA LQIDDVPLGG SRISIQAKET KVRVGHLPTD IELIH
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