| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20170 |
|---|
| Symbol | |
|---|
| ID | 8387344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2149315 |
|---|
| End bp | 2149845 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133862 |
|---|
| Protein GI | 257056030 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0976183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0396109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTCA ACCGATTGTT GCGTGCCTCC GAATCCGTCG ACCGCGTCGA CGGCCCCAGC
GAGAAACTGG CACATCGAGT GCGCCGAGTA CTGAAGAACA GTCCCGTGGA CCGTATGCTG
CGAGGTTCCT GGATCGGCCA CCCCGCACAC CCCCTCATCG TCACCGTCCC CATCGGTGCC
TGGGTGTGCT CGGCGGTGTT CGACGCACTC CGCCAACGCG ACGCCGCGCG CCACCTCATC
GCCATCGGCG CCCTCACAGC ACCCCTCGCG GCCATCACCG GATTGGCGGA GTTCTCCCGA
CTGTCCACCG TGCAACGACG CGTCGGTGCG CTGCATTTGT CGTCCAATGT CGTGGCACAA
GCGTGTTACC TTATCTCCCA CCGCTGCCGG ACTCGCAACG CCAACGGCGC CGGAACACTG
TGGGGGCTGG CCGGTCTGGC CGCGGTCGCG GCGGGAGGCG CACTCGGCGG TCATCTGTCC
TACGCCTTGG GCGCAGGCGT GCACGAATGG CAGGAAGGAC CGCAACCCTG A
|
|---|
| Protein sequence | MMLNRLLRAS ESVDRVDGPS EKLAHRVRRV LKNSPVDRML RGSWIGHPAH PLIVTVPIGA
WVCSAVFDAL RQRDAARHLI AIGALTAPLA AITGLAEFSR LSTVQRRVGA LHLSSNVVAQ
ACYLISHRCR TRNANGAGTL WGLAGLAAVA AGGALGGHLS YALGAGVHEW QEGPQP
|
|---|
| |