Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_20110 |
Symbol | |
ID | 8387338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2143709 |
End bp | 2144203 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976074 |
Product | hypothetical protein |
Protein accession | YP_003133856 |
Protein GI | 257056024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0332257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00184991 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGGCA CCGACACCGT CGATCGCGTC TTCGCGACCT ACCTCAACGA CCACCACGCC CTCGCCGTCG GCGGCGCGGA GCTGACCCGG CGCCTGGCTT CCCACCAACG TGATTCCGAG CACGCGACGG AGCTGGCCGC CTTACGCGAC GACGTGAGAG AGGACCTGCA CAGGCTGCGC CAGATCATGG CCACAGTGGG CGTACCTGTG CGTGCCTACA AGAGCGTCGC GGCCTGCGTG GCGGAGAAGT TCGGCCGGTG GAAGCTCAAC GGCAGACTCC TGAAACCGTC CCCGTCGAGC CCGGTGTTGG AGCTGGAAGG CGTCACCATG CTGCTGACGG CGAAAGCCGG GCTGTGGCGG AGTCTGCGTG CCCGGGCCCG CGGTGACGGC CGTATGGACC ACGACGCGCT GGACGAGTTG GCCCGGCGTG CCGACCAGCA GCTGGAGACC GCGCGCCGAC TGCACACCCG CTACGCCGAG GAAGCGTTCG GCTGA
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Protein sequence | MLGTDTVDRV FATYLNDHHA LAVGGAELTR RLASHQRDSE HATELAALRD DVREDLHRLR QIMATVGVPV RAYKSVAACV AEKFGRWKLN GRLLKPSPSS PVLELEGVTM LLTAKAGLWR SLRARARGDG RMDHDALDEL ARRADQQLET ARRLHTRYAE EAFG
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