Gene Svir_20110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20110 
Symbol 
ID8387338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2143709 
End bp2144203 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID644976074 
Producthypothetical protein 
Protein accessionYP_003133856 
Protein GI257056024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0332257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00184991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGGCA CCGACACCGT CGATCGCGTC TTCGCGACCT ACCTCAACGA CCACCACGCC 
CTCGCCGTCG GCGGCGCGGA GCTGACCCGG CGCCTGGCTT CCCACCAACG TGATTCCGAG
CACGCGACGG AGCTGGCCGC CTTACGCGAC GACGTGAGAG AGGACCTGCA CAGGCTGCGC
CAGATCATGG CCACAGTGGG CGTACCTGTG CGTGCCTACA AGAGCGTCGC GGCCTGCGTG
GCGGAGAAGT TCGGCCGGTG GAAGCTCAAC GGCAGACTCC TGAAACCGTC CCCGTCGAGC
CCGGTGTTGG AGCTGGAAGG CGTCACCATG CTGCTGACGG CGAAAGCCGG GCTGTGGCGG
AGTCTGCGTG CCCGGGCCCG CGGTGACGGC CGTATGGACC ACGACGCGCT GGACGAGTTG
GCCCGGCGTG CCGACCAGCA GCTGGAGACC GCGCGCCGAC TGCACACCCG CTACGCCGAG
GAAGCGTTCG GCTGA
 
Protein sequence
MLGTDTVDRV FATYLNDHHA LAVGGAELTR RLASHQRDSE HATELAALRD DVREDLHRLR 
QIMATVGVPV RAYKSVAACV AEKFGRWKLN GRLLKPSPSS PVLELEGVTM LLTAKAGLWR
SLRARARGDG RMDHDALDEL ARRADQQLET ARRLHTRYAE EAFG