| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20100 |
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| Symbol | |
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| ID | 8387337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2141283 |
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| End bp | 2143538 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976073 |
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| Product | aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein |
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| Protein accession | YP_003133855 |
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| Protein GI | 257056023 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0809165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000713838 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCATCG TCGGCACCAA GGTGGTCCGC GTCGAGGATG AGAAACTACT CACCACGGGC
GGCACCTACA TCGACGACCT TCGCGAGGAT GCGCTCACCG GAGCCGTCCA CGCGATGTTC
GTGAGAAGTC CGATCGCACA CGCGACCATC ACCTCGATCG ACACCTCGGA GGCGTTGTCC
GCCCCCGGTG TCGTCGCGGT CTACACAGCC GCTGACCTGG ACATAGAGCC GGCGAAGGCG
GGCCCGGTGA CACAGCCGTG GTTGGCCAGC GACGTCGTGC GCTACGTCGG GGAACCGGTG
GCCCTCGTGC TCGCCGAACA CCGGTACCAG CTTGCCGACG CGGCCGAACT CGTCGATGTG
GACTACGAAC CACTCGACGT GGTGGCCGAT GTCGAGACGG CGTTGGCCGG AGAGACGGTG
CTGCACCCGG AGCTGGACAC CAACGTGGTG CAGACCAAGG GCGGTGACTT CGCCGAGGAC
ACCTTCGCCG ACTGCGAGGT GGTGGTCACA AAGACCATCA CCAACCAGCG GGTGGCGGCC
GTGCCGCTGG AAGCGCGGGG AGCGGCTTGC GCCTGGGGCG AGGACGGTCG GCTGACCATG
TGGCTGTCGA CGCAGAACGC GCACTACGCC CAGAAGAGTC TGGCCAAGGG GCTCGGTCTC
GACATCGGAC AGATCCGCGT GATCACCCCG GATGTCGGCG GTGGCTTCGG CGCGAAGATC
GGTATCGACC CCGAACCGGT GGTACTGGCC TGGGCCGCGC GACGGGCGGG GCGTCCGGTG
CGGTGGTCGG AGACCCGCAG CGAGAACATG GTCTCGATGA CCCACGGCCG GGCGCAGCGC
AACACGATCA CCATCGGCGG CAAGAAGGAC GGCACGGTCC TCGCCTTCCG GTTGGAGGTG
GTGCAGGACG TGGGCGCCTA CCCGCGCACG CTGTACCTGC CGACCTTGAC CGAGATGATG
GCCCCCGGGG TGTACCGGTT CCCGAGGGTG GAGACCGCCA GTCGTGCGGT GGTCACCAAC
ACGACCCCCA TCGGCGCCTA CCGCGGCGCG GGGCGACCGG AGGCGACCGC GGCGGTGGAA
CGGGCCATCG ACCTGTTCGC CGCCGAGATC GGCGTCGACC CCGCCGAGGT GCGGAGGAAG
AATTTCATCC CGCCCGACGC CTTCCCCCAC ACCACGCCCA CCGGCGCCTC CTACGACAGC
GGTGACTACG CCGCCGCGCT GGACAAGGTG TTGGAAGCCG CGGGCTATGC CGAACTGCGG
GCGGAGCAGG CGCGTCGACG CGCCGAGAAG GACCCGATCG CCTTGGGGAT CGGGATGTCG
GCCTACGTCG AGATCACCGG TGCCGACAGC AGCGGTGACA GCGGACGGGT GGACATCAAC
CCGGACGGCA GCGTCACCGC CTACACCGGT GTCTCACCAC ACGGCCAAGG TATCCACACG
ACACTGGCGA TGCTGCTGTC CGACCGGCTC GGCGTGCCGA TGGAACGGAT CACGGTGCGG
CACGGGGACA CCGACGAGGT GCCCAAGGGA GTGGGCACGA TGGGGTCGCG GTCCTTGCAG
TTCGGTGGTT CGGCGATACG CAAGGCCGCC GACGAGGTGA TCGAGAAGGC CCGTCGGCTG
GCGGCCGATG CGTTGGAGGC GTCGGTCGAC GACCTCGAAC TGGACGTCGA GACGGGCACG
TGGCGCGTCC GCGGGGCCGC AGCCGCCGGT TCGGTCAGTT GGGCGGAGCT GGCGGCCGAG
GCCGAGCCCG GGGAGCTGTC GGCGGACGTG TGGTTCAACG AGCTCGCACC GACGTTCCCC
TTCGGCGCCC ACCTGGCGGT GGTCGAGGTG GACACTCTCA CCGGGAAAGT CGTGCTGCGG
CGCATCGTCG CGGTGGACGA CGCCGGACCC ATCCTCAACC CCGTGACCTT CCGGGGACAG
CGGCACGGCG GGCTGGCGCA AGGTGTGGCG CAGGCTCTGC TGGAGGTGAT GGACTACGAC
GCCGACGGCA ACCCGACCAC GGCCACGTTG GCGGACTACT CGTTCATCAC CGCCACCGAA
CTGCCCGACT TCGAGTTGGT GGACATGGTC ACCCCCACCA ACCGCAACCC GTTGGGGGTC
AAGGGCATCG GGGAGGCCGC CACCATCGGC TCGACCCCCG CGGTACAGAA CGCCGTCGTG
GACGCACTGG CACACCTCGG CGTGACACAC ATCGACATGC CCACGACGCC GATGCGGGTG
TGGGAGGCAT TGGCGCAAGG ACGAGAGGCG GATTGA
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| Protein sequence | MSIVGTKVVR VEDEKLLTTG GTYIDDLRED ALTGAVHAMF VRSPIAHATI TSIDTSEALS
APGVVAVYTA ADLDIEPAKA GPVTQPWLAS DVVRYVGEPV ALVLAEHRYQ LADAAELVDV
DYEPLDVVAD VETALAGETV LHPELDTNVV QTKGGDFAED TFADCEVVVT KTITNQRVAA
VPLEARGAAC AWGEDGRLTM WLSTQNAHYA QKSLAKGLGL DIGQIRVITP DVGGGFGAKI
GIDPEPVVLA WAARRAGRPV RWSETRSENM VSMTHGRAQR NTITIGGKKD GTVLAFRLEV
VQDVGAYPRT LYLPTLTEMM APGVYRFPRV ETASRAVVTN TTPIGAYRGA GRPEATAAVE
RAIDLFAAEI GVDPAEVRRK NFIPPDAFPH TTPTGASYDS GDYAAALDKV LEAAGYAELR
AEQARRRAEK DPIALGIGMS AYVEITGADS SGDSGRVDIN PDGSVTAYTG VSPHGQGIHT
TLAMLLSDRL GVPMERITVR HGDTDEVPKG VGTMGSRSLQ FGGSAIRKAA DEVIEKARRL
AADALEASVD DLELDVETGT WRVRGAAAAG SVSWAELAAE AEPGELSADV WFNELAPTFP
FGAHLAVVEV DTLTGKVVLR RIVAVDDAGP ILNPVTFRGQ RHGGLAQGVA QALLEVMDYD
ADGNPTTATL ADYSFITATE LPDFELVDMV TPTNRNPLGV KGIGEAATIG STPAVQNAVV
DALAHLGVTH IDMPTTPMRV WEALAQGREA D
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