Gene Svir_20090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20090 
Symbol 
ID8387336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2140807 
End bp2141286 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID644976072 
Productaerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein 
Protein accessionYP_003133854 
Protein GI257056022 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.099649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000822229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACAGCGT TGCGCGTCAC GATCGACATC AACGGACAGA CGATCTCCGA AGAGGTCGAG 
GACCGGACCC TACTCGTGCA CTTCGTGCGC GATGTCGCCG GATTGACGGC CACCAACATC
GGCTGCGACA CCACGTCCTG CGGCGCATGC ACCGTGCTGG TGGACGGCGA GTCGGTGAAG
TCCTGCACGA TGCTGGCGGC ACAGGCCGAC GGACGCCAGG TCACGACGCT GGAGGGACTG
AGCGACCAGG ACGGACAGGA ACATCCGCTG CGTGCGGCGT TCAAGAGACG ACACGGCCTG
CAGTGCGGCT TCTGCACCCC CGGCATGATC ATGGCGGCGG CGTCGCTGTT GCGGGAGAAC
CCCAAGCCCA CGCGGGAGCA GGTGCGGGAA GGCATCGAAG GTAACTTCTG CCGCTGCACC
GGCTACCAGA ACATCGTCGA TGCCGTGATC GACGCATCCG GTCAGGAGGT CGACCAGTGA
 
Protein sequence
MTALRVTIDI NGQTISEEVE DRTLLVHFVR DVAGLTATNI GCDTTSCGAC TVLVDGESVK 
SCTMLAAQAD GRQVTTLEGL SDQDGQEHPL RAAFKRRHGL QCGFCTPGMI MAAASLLREN
PKPTREQVRE GIEGNFCRCT GYQNIVDAVI DASGQEVDQ