| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20020 |
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| Symbol | |
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| ID | 8387329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2135470 |
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| End bp | 2136525 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976065 |
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| Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
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| Protein accession | YP_003133847 |
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| Protein GI | 257056015 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00294478 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGACGT TCGTGCGACT AGGACTGAAT CTGGGCTACT GGGGCGCTGG CAACGACGCG
TCCAATCTGG CGCTGGCCAA GGAGGCCGAC ACACTCGGTT ACTCGGTGGT GTGGGTCGCG
GAGGCGTACG GTTCCGACGC GCCGACGGTG TTGGCGTGGA TCGCGGCCCA GACGTCGTCG
ATCGACATCG GCAGTGCGGT CCTGCAGATC CCGGCGCGCA CTCCCGCGGC GACGGCGATG
ACCGCCGCCA CCTTGGACAC GCTCTCCGGG GGACGGTTCC GGCTCGGACT CGGCGTCTCG
GGGCCGCAGG TGTCGGAGGG GTGGCACGGC GTCCGGTTCA CCGCACCACT GGGTCGCACC
CGCGAGTACG TGGACATCGT GCGGACCGCG TTGCGTCGGG AGAAGGTGCG CTACGAGGGC
AAACATTTCC AACTGCCGCT GCCGGACGGG CCCGGCAAGG CGTTGACGTT GACCGTGCAC
CCCGTGCGGG AGCGGATCCC CATCTACTTG GCCGCGATCG GACCGAAGAA CCTGGAACTC
ACCGGGGAGA TCGCCGACGG GTGGCTGCCG GTGTTCTTCT CCCCCGAGTA CGCGAGCACC
CAGCTGGAAC ATGTGCAGGC GGGGGCGGCC AGGGCCGGTC GGGATCTGGC CGGGTTCGAC
ATCGCTCCGA CCGTGCCGTT CGTGCCCGGG GACGACTGGA CCGTGTGCGC TGACTCCGTG
CGCGCCTACG CGGCGCTGTA CCTGGGCGGT ATGGGCAGCC GGGAGAAGAA CTTCTACAAC
CAACTGGCGG TGCGCATGGG CTTCGCCGAC GCCGCCGCGG AAGTGCAGGA ACGCTACCTC
GCCAAAGACT ACGTGGGGGC GATGGCGGCG GTACCCCTGG AATTCCTCGA CGCGACGTCA
CTGCTCGGCC CGATGGAGCG GATCGCCGAG CGGATGGCCG CGTTCGCCGA GGCGGGGGTG
ACCACGTTGA GTCTGGCCCC GTTCGTCGAG CCGGCGAAGG GCACCGACGT GCTGCGCACG
GCGGTGGAGG CACTGGAAAG GTCGGGAGCG GCCTGA
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| Protein sequence | MSTFVRLGLN LGYWGAGNDA SNLALAKEAD TLGYSVVWVA EAYGSDAPTV LAWIAAQTSS
IDIGSAVLQI PARTPAATAM TAATLDTLSG GRFRLGLGVS GPQVSEGWHG VRFTAPLGRT
REYVDIVRTA LRREKVRYEG KHFQLPLPDG PGKALTLTVH PVRERIPIYL AAIGPKNLEL
TGEIADGWLP VFFSPEYAST QLEHVQAGAA RAGRDLAGFD IAPTVPFVPG DDWTVCADSV
RAYAALYLGG MGSREKNFYN QLAVRMGFAD AAAEVQERYL AKDYVGAMAA VPLEFLDATS
LLGPMERIAE RMAAFAEAGV TTLSLAPFVE PAKGTDVLRT AVEALERSGA A
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