Gene Svir_20000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20000 
Symbol 
ID8387327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2133887 
End bp2134591 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID644976063 
Productfructose-2,6-bisphosphatase 
Protein accessionYP_003133845 
Protein GI257056013 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.764392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00117347 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCCTGC TGCGGCACGG CCGGTCGAGC GCCAACAGTT CAGGCGTGCT GGCGGGCCGG 
GCACCGAAGG TCGGTCTCGA CGAGACCGGC CGCGCGCAGG CCGAGGCGTT GGTGCAGCGC
TTGGCCGGCG TCCCCGTGGC GGCCGTGGTG TCGTCACCGT TGCTGCGATG CAGGCAGACG
GTGGCGCCGC TGCTGGCCGA CCGAGGGCTG AGCCGGATCA CCGATTCCCG GTTGTCCGAG
GTCGACTACG GCGAATGGAC CGGCCGCGAA CTGAAATCGC TGGCCAAGGA ACCGCTGTGG
AAGGTGGTGC AGTTGCACCC GTCGGCAGCG GTGTTCCCCG GCGGCGAAGG ACTGGCGGCC
ATGCAGGCCA GGGCGGTGTC CGCGGTACGG GATCATGACG CCCGCATCAC CGGCGAGCAC
GGTGAGCACG CGGTCTGGGT GGCGTGCACC CACGGAGACG TGATCAAAGC GGTGTTGGCC
GACGCGCTCG GGCAACACCT CGACGCCTTC CAGCGCATCG TCATCGACCC GGGCTCGGTG
TCCGTCGTCC GCTACACGGA GACGCGGCCG TTCGTGCTGC GGGTCAACGA CAACGGCGGT
GATCTGGCCG GGATCGTGCC GCCGAAACCG AAACGACGTC GGCGGGGCAC GTTGTCCTCC
GATGCCGACG TCGGAGGAAC GACGGGACGA AAGGATCGAC CGTGA
 
Protein sequence
MILLRHGRSS ANSSGVLAGR APKVGLDETG RAQAEALVQR LAGVPVAAVV SSPLLRCRQT 
VAPLLADRGL SRITDSRLSE VDYGEWTGRE LKSLAKEPLW KVVQLHPSAA VFPGGEGLAA
MQARAVSAVR DHDARITGEH GEHAVWVACT HGDVIKAVLA DALGQHLDAF QRIVIDPGSV
SVVRYTETRP FVLRVNDNGG DLAGIVPPKP KRRRRGTLSS DADVGGTTGR KDRP