| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19930 |
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| Symbol | |
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| ID | 8387320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2126157 |
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| End bp | 2127461 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976056 |
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| Product | hypothetical protein |
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| Protein accession | YP_003133838 |
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| Protein GI | 257056006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000770232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000700572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACTGTCG ACGTCGTGGA CCTTTGCGCC CAACTCATCC GCTTCGACAC CACCAACCAC
GGCGGCGGCG ACGCCCGCGG AGAACGCGAA GCCGCCGAAT TCTGCGCCAC CATCCTCGCC
GACGCCGACC TCGAACCCAC CATCCTCGAA TCCGCACCCC GCCGCGCCAA CGTCGTCACC
CGCATCCCCG GCGACGACCC CACCCTCGCC CCCCTCCTCA TCCAAGGACA CCTCGACGTC
GTCCCCGCCG ACGCGACCGA ATGGAGCGTC CCCCCGTTCT CCGGCACCGT CTCCGACGGC
TACCTGTGGG GCCGCGGCGC CGTGGACATG AAAGACTTCT GCGCCACCGT CCTCGCCGCC
GTCCACACCC TCACCACCAC CGGACGCCGA CCCCGCCGCG ACATCGTCCT CGCCTTCGTC
GCCGACGAAG AAGACCGAGG CGAATACGGC GCAGAATGGC TCGTCACCCA CCACCCCCAC
CTCTTCGCCG ACTGCGCCGC CGCCATCAGC GAATCCGGCG GCTACACCTA CCACGTCCGC
GCCGCCGACG GCCGCCCCGT CCGCCTCTAC CCCATCGGCA CCGCCGAACG CGGCACCGCC
CACCTCAAAC TCACCGCCCG AGGCCGCGCC GGACACGGCT CCCGCCGCAA CGACGCCAAC
GCCGTCACCC GCCTCATCAC CGCACTACAC GCCCTGGCCA CCCACGACTG GCCCGTCGTC
CTCACCCCCA CCGTCGAAGC ATTCCTCGAA CGCACCGGCC AAGCACTCGG CGTCACCGTC
GACCTCCACG ACATCGACAC CACCCTCGAC CGACTCGGCG ACGCCGCCCC ACTGGCCGAA
TCAGTCGTCC GCAACAGCGT CACCCCCACC GTCCTGTCCG CCGGATACAA GGTCAACGTC
ATCCCCGGCC TCGCCGAAGC CCACGTCGAC GGCCGCGTAC TACCCGGAAC CGAAGCAGCC
CTACTGTCCC AAGTAGACGA ACTCATCGGC CCCCACGTCG AATACGAATT CCTCTCCCGC
AGCAAACCCG TCCAAGCCCC CGTGGACTCA CCCTGGTTCG ACGCGCTGAG CAACGCACTC
CGCTCACAAG ACCCCGACGC CGTCGTCGTG CCCTACTGCC TCGGCGGCGG AACCGACGCC
AAAGCCTTCA GCGAACTCGG CATCGACTGC TACGGCTTCG CCCCACTGTG GCTCCCCGAA
GGGTTCAACT ACCGCGCCAT GGCCCACGGC ATCGACGAAC GCGTCCCCGT CGAAGGCCTC
CGCTTCGGCA CCCGCGTACT AGAACACCTG CTCCTGCACG CCTGA
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| Protein sequence | MTVDVVDLCA QLIRFDTTNH GGGDARGERE AAEFCATILA DADLEPTILE SAPRRANVVT
RIPGDDPTLA PLLIQGHLDV VPADATEWSV PPFSGTVSDG YLWGRGAVDM KDFCATVLAA
VHTLTTTGRR PRRDIVLAFV ADEEDRGEYG AEWLVTHHPH LFADCAAAIS ESGGYTYHVR
AADGRPVRLY PIGTAERGTA HLKLTARGRA GHGSRRNDAN AVTRLITALH ALATHDWPVV
LTPTVEAFLE RTGQALGVTV DLHDIDTTLD RLGDAAPLAE SVVRNSVTPT VLSAGYKVNV
IPGLAEAHVD GRVLPGTEAA LLSQVDELIG PHVEYEFLSR SKPVQAPVDS PWFDALSNAL
RSQDPDAVVV PYCLGGGTDA KAFSELGIDC YGFAPLWLPE GFNYRAMAHG IDERVPVEGL
RFGTRVLEHL LLHA
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