Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19920 |
Symbol | |
ID | 8387319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2125275 |
End bp | 2126102 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976055 |
Product | D-aminopeptidase DppA |
Protein accession | YP_003133837 |
Protein GI | 257056005 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000508019 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000487782 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGGATCA TGATCTCCGC CGACATGGAA GGCGCCACCG GCGTCACCTG GACCGACGAC GTCGTCCCCG GAACCGAACA ATGGCAACGC TTCCGCCGAC TGTTCACCGG CGACGTCAAC GCCGTCATCA CCGGCCTCTA CGAAGGCGGC GCCACCGACG TGTTGGTCAA CGAAGCACAC TCCTCCCAAC GCAACCTGCT GTTGGAAGAC CTCGACCCCC GCGCCCGCAT GCTCACCGGC AGACACAAAC CACTGTCGAT GATGGAGGGC ATCGACACCG GCGTCGACGG CGTCGTCTTC CTCGGCTACC ACGCCGCGGC AGGCTGCGAC GGCGTGCTTT CCCACACCTA CCTGCCCAAC CAGATCACCG GGGTCTGGCT CGACGGCGTC CTCGCCAGCG AAGGCCGACT CAACGCCGCA CTCGCCGCCG AATACGGCGT ACCCGTCCTT TTGATCAGCG GCGACGACAA AACCTGCGAC GACGCCCGCG ACTACGCCCC CCAGGCCGCC ACCGTCGCCG TCAAAGAGTG CATCAGCCGC TACGCCGCCA TCTGCCTACC ACCCTCCCGC ACCACAGCCG ACCTCGCCGA CGCGGCCCAA CGCGCCATGC AACACGCCGG ACGAGGCACC CCCACCACCC AAGCCCACCA CATCGACGTC GAGTTCGACG CCAGCCACCT CGCCCAGGCG GCCGCCGTCA TCCCCACCGT CGAACAAACC GGCGTCCGCA CCGTCAGCTT CGACGCCCCC ACCATGACCG AGGCGATGAA AACGTTCAAA ATCGTCACCG CCATCGCCGA CAGCGCCGTC CAAGGCAAAT ACGGCTAA
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Protein sequence | MRIMISADME GATGVTWTDD VVPGTEQWQR FRRLFTGDVN AVITGLYEGG ATDVLVNEAH SSQRNLLLED LDPRARMLTG RHKPLSMMEG IDTGVDGVVF LGYHAAAGCD GVLSHTYLPN QITGVWLDGV LASEGRLNAA LAAEYGVPVL LISGDDKTCD DARDYAPQAA TVAVKECISR YAAICLPPSR TTADLADAAQ RAMQHAGRGT PTTQAHHIDV EFDASHLAQA AAVIPTVEQT GVRTVSFDAP TMTEAMKTFK IVTAIADSAV QGKYG
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