| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19900 |
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| Symbol | |
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| ID | 8387317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2122279 |
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| End bp | 2123325 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976053 |
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| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
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| Protein accession | YP_003133835 |
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| Protein GI | 257056003 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00317245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000399681 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGTCG TGACGGTGCC GTCGACCGAC GCCGCATCCG GTCCGGGCTC TTTGCAGGAG
GGCCCGGACC GGCGCGGTGC CGGTGGTTCC ACGGTTCGGT TCCTCGCGTC GAAGCTGGGT
GGGGCGCTGG CGAGTTTCTC GCTGGTGGTC GTGCTCGGGT TCTTGTTGTT CCGGATGATC
CCGGGTGACC CGGTGGCCAC GATGACGCGG GACCGGCCCA CGAGCCCGGA GCAGCTGGCG
GAGCTGCGGG AACGGCTCGG GGTCGACAAG CCCATGCACG AGCAGTTCAT CGACTACGTA
CTCGGGCTGC TGCGAGGGGA TCTGGGCACG TCCTACATGT ACAACCGGCC GGTGGCGGAC
ATGATCGGGG AACGGTTGTG GCCGACGCTG CTGCTGGTGG GCACGGCGAC GCTGTTGGCG
GTGGCGCTGG GCCTGTGGTT GGGGGTGCGT GCGGCGTGGC GTCACGGCAG CGCGTTCGAC
CGGGTCAGCA CCGGGGTGGC GTTGACGTTG TGGTCGATGC CGCAGTTCTG GCTCGGCTTG
CTGCTGCTGA TCGCGACCCA GGGGTTGTTC CCGAGCCGGG GGATGCGGTC GCCGGTGATC
CCCGAGAACC CTGTGGCGCA GGTGTTGGAC GTGGCGCATC ACCTGGTGTT GCCGTGTGTG
ACGTTGCTGG CGGTGATCTA CGCGCAGTAC ATGCTGGTGA TGCGGTCGTC GCTGTTGGAG
GAGATGGGCG CGGACTATCT GACGACGGCG CGGGCGAAGG GACTGCGGGA CGACCTGGTG
CGGCGTCGAC ACGCGGTGCC GAACGCGTTG CTGCCGACGG TGACGTTGGT GTTTTTGCAG
TTCGGCATGG TGGTGTCGGG CACGGTCACG GTGGAGACGG TGTTCTCGTG GCCGGGGCTG
GGGTTGTTGA CGTATGAGGC GTTGCGGGGG CCGGATCTGC CGCTGCTGCA GGGCGTGTTC
GTGGTGTTGG CGTCCTCGGT GTTGGTGATG AACCTGCTGG CCGAGCTGTT GTACCGGGTG
TTGGACCCGA GGGTGCGTGA GTCATGA
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| Protein sequence | MSVVTVPSTD AASGPGSLQE GPDRRGAGGS TVRFLASKLG GALASFSLVV VLGFLLFRMI
PGDPVATMTR DRPTSPEQLA ELRERLGVDK PMHEQFIDYV LGLLRGDLGT SYMYNRPVAD
MIGERLWPTL LLVGTATLLA VALGLWLGVR AAWRHGSAFD RVSTGVALTL WSMPQFWLGL
LLLIATQGLF PSRGMRSPVI PENPVAQVLD VAHHLVLPCV TLLAVIYAQY MLVMRSSLLE
EMGADYLTTA RAKGLRDDLV RRRHAVPNAL LPTVTLVFLQ FGMVVSGTVT VETVFSWPGL
GLLTYEALRG PDLPLLQGVF VVLASSVLVM NLLAELLYRV LDPRVRES
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