Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19820 |
Symbol | |
ID | 8387309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2113355 |
End bp | 2113933 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976045 |
Product | hypothetical protein |
Protein accession | YP_003133827 |
Protein GI | 257055995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00011431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCGTG TCATTCACGT TTTCCGCCAA CCCGACCGCT TCGTCGCGGG TACCGTCGGG CAGCCCGGTG ATCGCACGTT CTACCTGCAG GCACGGGAGA ACACGCGCAC CGTCAGCGTG GTTTTGGAAA AGCAGCAAGT CGCGGTCCTG GCCGAGCGGT TGGCGTCGCT GTTGGAGGAG GTCGCCAACC GGTTCGGTGC CACCGTGCCC GACGACGTCC CCGAAGAACT CATCGACACC GACCCCTTGG ACGTGCCGTT GGAGGAGGAG TTCCGGGTCG GCACGATGGG ACTCGGCTGG GACGCCGAAA GCAAAACGGT GGTCATCGAA CTGCTGGCCA TCACCGACAC CGAGATCGAC GAAGCCGTCG TCCTCGACGA CACCGAGGAA GGCCCGGACG CCGTGCGGGT GTTCCTCACC CCGGCCGCCG CCCGCGCGTT CGCCGCCCGC GCCGACCGCG TGGTCAACGC CGGACGCAAA CCCTGCCCGC TGTGCGGTGA ACCACTCGAC CCCTCCGGCC ACATCTGCCC CCGCCAGAAC GGATACCGGC GCAACACCGA ACTCGCCGGT GAGGACTGA
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Protein sequence | MARVIHVFRQ PDRFVAGTVG QPGDRTFYLQ ARENTRTVSV VLEKQQVAVL AERLASLLEE VANRFGATVP DDVPEELIDT DPLDVPLEEE FRVGTMGLGW DAESKTVVIE LLAITDTEID EAVVLDDTEE GPDAVRVFLT PAAARAFAAR ADRVVNAGRK PCPLCGEPLD PSGHICPRQN GYRRNTELAG ED
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