Gene Svir_19820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19820 
Symbol 
ID8387309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2113355 
End bp2113933 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID644976045 
Producthypothetical protein 
Protein accessionYP_003133827 
Protein GI257055995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00011431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGTG TCATTCACGT TTTCCGCCAA CCCGACCGCT TCGTCGCGGG TACCGTCGGG 
CAGCCCGGTG ATCGCACGTT CTACCTGCAG GCACGGGAGA ACACGCGCAC CGTCAGCGTG
GTTTTGGAAA AGCAGCAAGT CGCGGTCCTG GCCGAGCGGT TGGCGTCGCT GTTGGAGGAG
GTCGCCAACC GGTTCGGTGC CACCGTGCCC GACGACGTCC CCGAAGAACT CATCGACACC
GACCCCTTGG ACGTGCCGTT GGAGGAGGAG TTCCGGGTCG GCACGATGGG ACTCGGCTGG
GACGCCGAAA GCAAAACGGT GGTCATCGAA CTGCTGGCCA TCACCGACAC CGAGATCGAC
GAAGCCGTCG TCCTCGACGA CACCGAGGAA GGCCCGGACG CCGTGCGGGT GTTCCTCACC
CCGGCCGCCG CCCGCGCGTT CGCCGCCCGC GCCGACCGCG TGGTCAACGC CGGACGCAAA
CCCTGCCCGC TGTGCGGTGA ACCACTCGAC CCCTCCGGCC ACATCTGCCC CCGCCAGAAC
GGATACCGGC GCAACACCGA ACTCGCCGGT GAGGACTGA
 
Protein sequence
MARVIHVFRQ PDRFVAGTVG QPGDRTFYLQ ARENTRTVSV VLEKQQVAVL AERLASLLEE 
VANRFGATVP DDVPEELIDT DPLDVPLEEE FRVGTMGLGW DAESKTVVIE LLAITDTEID
EAVVLDDTEE GPDAVRVFLT PAAARAFAAR ADRVVNAGRK PCPLCGEPLD PSGHICPRQN
GYRRNTELAG ED