Gene Svir_19760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19760 
Symbol 
ID8387303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2108236 
End bp2108673 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID644976039 
Producthypothetical protein 
Protein accessionYP_003133821 
Protein GI257055989 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.113314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00158371 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTACC TGATGTTCGT CAAGTCGGAC GAGGAAACCG AGGCCGGTGC CCTGCCCACC 
GAGCAGGAAC TGGCCGACAT GACCGCCTTC AACGAACGGC TCGTCAAGGC GGGGGTGATG
ATCGACGGCA ACGGACTCGC CCCCACGTCC GAGGGCGCCC GCGTCCTCTT CGACGAACAC
AACACCCCCA TCGTCGTCGA CGGTCCTTTC ACCAAAGCCA AGGACCTCGT GGCCGGCTAC
TGGCTTGTGG AGGTCTCCTC CCGAGAGGAA GCCGTGGAGT GGGCCTGCCG CGCCCCGCTC
GGTCCCGGCG GCCAGATCGA GATCCGCCGG GTGCTCACCG ACGAGGACTT CGGCGACAGC
CTCACCCCGG AATTGAAGGA AGCGGAAGCA CGTATGCGTG ACGCCGAAGC CCGACGCCGC
GAGGAACTGT CACGCTGA
 
Protein sequence
MRYLMFVKSD EETEAGALPT EQELADMTAF NERLVKAGVM IDGNGLAPTS EGARVLFDEH 
NTPIVVDGPF TKAKDLVAGY WLVEVSSREE AVEWACRAPL GPGGQIEIRR VLTDEDFGDS
LTPELKEAEA RMRDAEARRR EELSR