Gene Svir_19670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19670 
Symbol 
ID8387294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2098516 
End bp2099511 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content64% 
IMG OID644976030 
Productpredicted amidohydrolase 
Protein accessionYP_003133812 
Protein GI257055980 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0104138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA CCCGCGTCGC ATCCGTCCAA GCCGAACCCG CCTGGCTCGA CCTACCGGCC 
ACAACCGACA AAACCATCGA CCTGATCCGC CAAGCCGCCC ACAACGACGC CCGACTCATC
GCCTTCCCCG AACTATGGCT ACCGGGCTAC CCCATCTTCC TGATGAGCAC CACCGTCTCC
GAGGAACTGC CCTACGTCCT GCGCTACCGC GCGGCCGCCC TCGCCGTGGA CTCCCCCGAG
ATGATGCGAC TGCGCCTGGC CGCCCGAGAA AACGACATCA TCGTCGCCCT CGGATTCGCC
GAACGAGCCG AAAGCTCGCT CTACATGTCG CAATGCGTCA TCGACGAAAC CGGAGCCATC
GTCCTCCACC GCCGCAAACT CAAACCCACC CACGTCGAAC GCACCCTGTT CGGCCAAGGC
GACGGCAGCG ACCTCCAAGT GACCCCCACC TCGATCGGCC GCATCGGCGC ACTCAACTGC
GCGGAAAACA TGCAACCCCT GACGAAATTC GCCCTCATCG CCGAGGACGA ACAAATCCGC
GTCTCCTCAT GGCCACCGCT GGACTACTAC GGCGGCCCCT TCCTCAGCGG CGAGAACATC
ACCGCACTCA ACCAAGCCAA CGCCATGGAA GCCAGCGAAT TCGTCCTGAT GTCGACCCAA
GTCGTCTCCG AGCACGCCAG CCGCGTCTTC AGCTCCGAAC CAGGCACCTC AGCCCCACCC
TTCACAGGCG GCGGCTACGC CCGCATCTTC GGACCGGACA GCACCCTGCT CAGCGACGTC
CTACCCCCCG AACAAGAAGG CATCGTCTAC GCCGACATCG ACCTGACCGC CATCGAAATC
GCCAACCACT ACTTCGACCC GGTCGGCCAC TACTCCCGAC CCGACATCTT CGAAGTGACC
ATCGACCGCC GCCCCAAACC CGCCGTCCAC CAGATCACCT CAGAAACCCA CCGCTCCTAC
CCACCCCTCG CCCCGGAGGA CACCCACCAC GACTAA
 
Protein sequence
MTTTRVASVQ AEPAWLDLPA TTDKTIDLIR QAAHNDARLI AFPELWLPGY PIFLMSTTVS 
EELPYVLRYR AAALAVDSPE MMRLRLAARE NDIIVALGFA ERAESSLYMS QCVIDETGAI
VLHRRKLKPT HVERTLFGQG DGSDLQVTPT SIGRIGALNC AENMQPLTKF ALIAEDEQIR
VSSWPPLDYY GGPFLSGENI TALNQANAME ASEFVLMSTQ VVSEHASRVF SSEPGTSAPP
FTGGGYARIF GPDSTLLSDV LPPEQEGIVY ADIDLTAIEI ANHYFDPVGH YSRPDIFEVT
IDRRPKPAVH QITSETHRSY PPLAPEDTHH D