Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19630 |
Symbol | |
ID | 8387290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2091593 |
End bp | 2093563 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644976027 |
Product | heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting |
Protein accession | YP_003133809 |
Protein GI | 257055977 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00267622 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0638812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACG CCTGCGGCTG CGGCAGCGAC GAGCCCCGCA CCGGCGAGGA AGAAGAGCGC GAGCCGGAAC GGCTCTGGCA GGTCAGCGAA CTGCGCTTCG CCGCGATCGC CGGGGTGCTG CTGCTGGCCG GATACGCGGT GGAGTGGGCC GGGGCGGGCT CCACACTGGC GCTGGCCCTG AAGGCGCTGG CCTTGGTCGC CGGGGCCTAC ACCTTCGTGC CCTCCACGCT GAAGCGACTG GCCCAGGGCA AGATCGGGGT CGGCACCCTG ATGACCATCG CCGCGGTCGG CGCGGTGATC CTGGGTGAGG TCGGCGAGGC CGCGATGCTG GCCTTCCTCT ACTCCATCAG CGAGGGCCTG GAGGAATACT CCCTGGCCCG CACCCGCCGC GGGCTGCGGG CGCTGCTGTC CCTGGTCCCC GAGGAAACCA CGGTGCTGCG CAACGGCAGC GAGACCGTGG TGGCCCCGTC CGAGTTGCGG GTCGGGGACC GGATGCTGGT CAAGCCCGGG GAGCGCATCG CCACCGACGG CGTGATCCGC ACCGGCCGCA CCGCGCTGGA CGTCTCCGCG ATCACCGGCG AGTCCGTGCC GGTCGAAGCG GGCCCCGGCA GTGAGGTGTT CGCCGGGTCG ATCAACGGCA CCGGGGTGCT GGAGGTCGAG GTCACCACGA CCTCCGAGGA CAACTCACTA GCGCGGATCG TGCGGATCGT GGAGGCCGAG CAGTCCCGCA AGGGCGCCAG CCAGCGCCTG GCCGACCGCA TCGCCAAACC CCTGGTGCCC GGCGTCATGA TCGCCGCCGC GCTCATCGCC GGAATCGGCA GCCTCCTCGG CGACCCGACC ACCTGGATCG AACGCGCCCT GGTCGTGCTC GTGGCCGCCT CACCCTGCGC GCTGGCGATC TCCATCCCCG TCACCGTCGT CGCCGCCATC GGTGCCGCGA GCAAGCACGG TGTGCTGGTC AAGGGCGGCG CCGCGCTGGA GGCCCTCGGC CGCGTGCGGG GGGTGGCGCT GGACAAGACC GGCACCCTGA CCCGCAACCA GCCCGCCGTG GTCGACGTCG CCACCACCGA CGGGACCCCG CGCGAGCGGG TGCTCGAGCT GGCCGCGGCG TTGGAGGCCC GCAGCGAACA CCCCCTGGCC CGCGCGATCC TCGCCGCCGT CGACGGCGAG ACGATCACCC CCGCGGCCGA CGTGGAGGCG GTCACCGGCG CCGGGCTGAC CGGCCAGCTC GACGGCCGCC CGGTGCGGCT GGGCCGCCCC GGCTGGCTGG AAGCCGGGCC GCTGGCCGCC GAGGTGCAGC GCATGCAGCA GGCCGGGTCC ACCGCCGTGC TCGTCGAGGA CGACGGCCGC GTGATCGGCG CGATCGCCGT GCGCGACGAA CTGCGCCCCG AAGCCGCCGA GGTCATCACC CGGCTGTGCT CCGGCGGCTA CCACGTCGCC ATGCTCACCG GCGACAACCA CGCCACCGCC ACCGCCCTGG CCGCCGAAGC CGGTATCGAC ACCGTGCACG CCGAACTCCG CCCGGAGGAC AAGGCCCGCA TCATCAGCGA ACTGGGCGAC CGGCGATCGA TGGCGATGGT CGGTGACGGT GTCAACGACG CCCCCGCCCT GGCCACCGCC GACCTGGGCA TCGCCATGGG CGCCATGGGC ACCGACGTCG CGATCGAAAC CGCCGACGTC GCCCTCATGG GCGAAGACCT GCGGCACCTG CCCCACACCC TCGACCACGC CCGCCGCGCC CGACGGATCA TGCTGCAAAA CGTCGGACTC TCCCTCGGGT TGATCATCGC TTTGATGCCG CTGGCGCTGT TCGGCGTCCT CGGCCTGGCC GCGGTGGTGC TGGTGCACGA GGTGGCCGAG GTCGTGGTCA TCGCCAACGG GGTGCGCGCC GGCCGCGCCA AGCCGCTGCC CACACTGCCC GGCGGCAAGC CTGTGGCGGA GCGGCCCGCG ACAGTGGGGG CCTCGGCGTA A
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Protein sequence | MSDACGCGSD EPRTGEEEER EPERLWQVSE LRFAAIAGVL LLAGYAVEWA GAGSTLALAL KALALVAGAY TFVPSTLKRL AQGKIGVGTL MTIAAVGAVI LGEVGEAAML AFLYSISEGL EEYSLARTRR GLRALLSLVP EETTVLRNGS ETVVAPSELR VGDRMLVKPG ERIATDGVIR TGRTALDVSA ITGESVPVEA GPGSEVFAGS INGTGVLEVE VTTTSEDNSL ARIVRIVEAE QSRKGASQRL ADRIAKPLVP GVMIAAALIA GIGSLLGDPT TWIERALVVL VAASPCALAI SIPVTVVAAI GAASKHGVLV KGGAALEALG RVRGVALDKT GTLTRNQPAV VDVATTDGTP RERVLELAAA LEARSEHPLA RAILAAVDGE TITPAADVEA VTGAGLTGQL DGRPVRLGRP GWLEAGPLAA EVQRMQQAGS TAVLVEDDGR VIGAIAVRDE LRPEAAEVIT RLCSGGYHVA MLTGDNHATA TALAAEAGID TVHAELRPED KARIISELGD RRSMAMVGDG VNDAPALATA DLGIAMGAMG TDVAIETADV ALMGEDLRHL PHTLDHARRA RRIMLQNVGL SLGLIIALMP LALFGVLGLA AVVLVHEVAE VVVIANGVRA GRAKPLPTLP GGKPVAERPA TVGASA
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