Gene Svir_19620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19620 
Symbol 
ID8387289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2091213 
End bp2091596 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content73% 
IMG OID644976026 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003133808 
Protein GI257055976 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00139009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0620554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGGT GCCTGGCGTC GAGCCCGCCG GGCGCGAACC TGGATCCGGC TGTGGCGTTG 
TTTCACAGCC TGTCGGACGC CACGCGGTTG GCGATCGTGC AGCGCCTGGC CGGCGGGGAG
GCCCGGGTCG CCGATCTGAT CGCCGAGCTG GGGCTGGCGC AGTCGACGGT GTCGGCGCAC
GTGGCGTGCC TGCGGGACTG CGGGCTGGTC GTGGGGCGCC CGCAGGGGCG GCAGGTGTTC
TACAGCCTGG CCCGCCCGGA GCTGATGGAC CTGCTGGCCT CGGCTGAGAC GCTGCTGGCC
GCGACCGGCA ACGCGGTGGC GCTGTGCCCG ACCTACGGCA CCGACACCAC CGGTGATACC
GAGAACGGGG AGGTCGTGCG GTGA
 
Protein sequence
MEGCLASSPP GANLDPAVAL FHSLSDATRL AIVQRLAGGE ARVADLIAEL GLAQSTVSAH 
VACLRDCGLV VGRPQGRQVF YSLARPELMD LLASAETLLA ATGNAVALCP TYGTDTTGDT
ENGEVVR