Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19590 |
Symbol | |
ID | 8387286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2086298 |
End bp | 2087233 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644976023 |
Product | transcriptional regulator |
Protein accession | YP_003133805 |
Protein GI | 257055973 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.221792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0758544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACC CGAGGTTGCG GGTGCTGCAG ATGGTGGCCC ACCACGGCAC GGTGACCGCC GCCGCGGAGG CGCTGCACTA CACCCCGTCC GCGGTCTCGC ACCAGTTGCG GCAGTTGGCC GCCGATCTCG GAGTCGAGCT GGTCACCCAG GCCGGCCGGG GCATCCGGCT GACCCCCGCG GCGGAGACCC TGCTCCGCCA CACGGAGGTA CTGCAGGCCC AGGCCGAACG GGCGCGCGCC GAGTTGGCCG CCGCCAGCGA CAGTCCCGGC GGGTCCTTCA CCCTGTGCGG TTTCTCCACG GCCGCCACCC ATCTGCTGCC CCCGGCCGCG GCGGCCCTGC GGGACCACTA CCCGAACCTG GCCGTGCGGG TCATCGAAGC CGAACCCGCC CGTTGTTTCG ACCTGTTGTT GGCCGGTGAC GCCGACCTGG CGCTCGTGGT CGCCACCGCC TCCACCCCGC CGACGTCGGA CCCACGGTTC GACCAGCGCC CCTTGGTGGA AGACCCGCTC GACCTCGTCG TGCCCGAAGG CCATCCGCTG ACCACCCGCC GCAAGGTCAC ACTCGGCGAC GCCGTCGACG AACCCTGGAT CGTGGGGCGG CCCGGAAGCA CCTACCACCA TCTGGTGCTC ACCGCCTGCA TGGCGGCCGG GTTCACACCC AACATCGCCC ACTACGCCGA CGAATGGGAA ACCGGCACCG CCCTGGTCGC CCACGGCTTC GGTGTCATCC TCGTGCCGCG ACTCGCCCGA CTGCATCGAC ACTGGCCCAT CGCCCGCATC CCCTTGCACG GTGAGCCCGC CCCGGCCCGG CGGATCCTCG CCGCCACCCG CCTCGGCAGC CGCGAACACC CCGTGGTCAA GACCGCCCTG GACACCATCA CCGCTACCGA CGCCGCCCTG CACCCCCTCC ACCGGGCCGA GGAACGGTCG GACTGA
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Protein sequence | MIDPRLRVLQ MVAHHGTVTA AAEALHYTPS AVSHQLRQLA ADLGVELVTQ AGRGIRLTPA AETLLRHTEV LQAQAERARA ELAAASDSPG GSFTLCGFST AATHLLPPAA AALRDHYPNL AVRVIEAEPA RCFDLLLAGD ADLALVVATA STPPTSDPRF DQRPLVEDPL DLVVPEGHPL TTRRKVTLGD AVDEPWIVGR PGSTYHHLVL TACMAAGFTP NIAHYADEWE TGTALVAHGF GVILVPRLAR LHRHWPIARI PLHGEPAPAR RILAATRLGS REHPVVKTAL DTITATDAAL HPLHRAEERS D
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