Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19550 |
Symbol | |
ID | 8387282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2080652 |
End bp | 2081737 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976019 |
Product | serine/threonine protein phosphatase |
Protein accession | YP_003133801 |
Protein GI | 257055969 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.17725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.381768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAC TGAGCATCGG CGCATTCGCC CAGGCTTGTG GGCTCACCCC CAAAGCGTTG CGGTTGTACG ACGAATTGGG ACTGCTGACC CCCGCGCGGG TCGACGCCTG CACCGGCTAC CGCTACTACG AACGGTCGCA ACTGGATCGG GCGCGGCTCA TCGCGTGGCT GCGGGGAATC GGCATGCCGT TGTCCCGTAT CCGGGTCGTC TGCGATCTCC CGCGGGCCGC GGCCGCGCAG GAGATCAGCA CGTACTGGCA CCAGGTCGAA GCCGACATCG CCGCTCGCCG GGAGACCGTC TCCTTCCTCG TCGACCGACT GTCAGGAAAG GACCCCACCA TGTCCGCCCA CCACACACCT GTGCGCCTGA ACCACGCCTG CGTCCTCGAC CGGGGTCTTG TCCGGAACAC CAATCAGGAC GCCCTCTATG CCGGCGGCGC ACTGTTCGCC GTCGCCGACG GTTTCGGCCC AGGCGCAGAA CACGGAAACA CCGGCAACGG CGAGGGTGCC GCCTCGGCCA CCGCGGTGGC GGCGTTGCGC TCCGCCGACA CCGTGGTACC ACCCGAAAAA CTCACCACCA CCCTGCTGGC CGGCTTCCAC GACGCCCGCG CGAGCGTCAA CCGCGTCGCT GGCGCACCGG ATGCCGGAAC GACACTGACC GCACTGCTGT GGTCCGGCGC CGATTTCGCC CTCGCCCACG TCGGCGATTC CCGCGCCTAT CTCGTGCGCG AGGGTGAACT GGAATCGTTG ACCCACGACC ACACCTACGT GCAGTCGTTG GTGGACGAAG GGCGCCTCAC CCCCGAGGAG GCCCAAACCC ACCCCGAACG CACCACCCTG GTGCGTGCAC TGTGTGGCCT GAAAACCACC GAACCCGACC TACACCTGCG ACAAGCCATG CCGGGTGACC GGTATCTGCT GTGCACGGAC GGCGTGTACG CCGTCGTGGA CGACCTGCAG GAACTGCTGA CCACCGCCAC CGCCCCGCAG GAGGCGGTCG ACCGGATCTC CGCCGCGGCA CACGCCGCCG GGGCGCCGGA CAACCTGGCC TGCATCGTCG TCGACGTACA CGCCTCCGAC CACTAG
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Protein sequence | MAALSIGAFA QACGLTPKAL RLYDELGLLT PARVDACTGY RYYERSQLDR ARLIAWLRGI GMPLSRIRVV CDLPRAAAAQ EISTYWHQVE ADIAARRETV SFLVDRLSGK DPTMSAHHTP VRLNHACVLD RGLVRNTNQD ALYAGGALFA VADGFGPGAE HGNTGNGEGA ASATAVAALR SADTVVPPEK LTTTLLAGFH DARASVNRVA GAPDAGTTLT ALLWSGADFA LAHVGDSRAY LVREGELESL THDHTYVQSL VDEGRLTPEE AQTHPERTTL VRALCGLKTT EPDLHLRQAM PGDRYLLCTD GVYAVVDDLQ ELLTTATAPQ EAVDRISAAA HAAGAPDNLA CIVVDVHASD H
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