Gene Svir_19550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19550 
Symbol 
ID8387282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2080652 
End bp2081737 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID644976019 
Productserine/threonine protein phosphatase 
Protein accessionYP_003133801 
Protein GI257055969 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.17725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.381768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAC TGAGCATCGG CGCATTCGCC CAGGCTTGTG GGCTCACCCC CAAAGCGTTG 
CGGTTGTACG ACGAATTGGG ACTGCTGACC CCCGCGCGGG TCGACGCCTG CACCGGCTAC
CGCTACTACG AACGGTCGCA ACTGGATCGG GCGCGGCTCA TCGCGTGGCT GCGGGGAATC
GGCATGCCGT TGTCCCGTAT CCGGGTCGTC TGCGATCTCC CGCGGGCCGC GGCCGCGCAG
GAGATCAGCA CGTACTGGCA CCAGGTCGAA GCCGACATCG CCGCTCGCCG GGAGACCGTC
TCCTTCCTCG TCGACCGACT GTCAGGAAAG GACCCCACCA TGTCCGCCCA CCACACACCT
GTGCGCCTGA ACCACGCCTG CGTCCTCGAC CGGGGTCTTG TCCGGAACAC CAATCAGGAC
GCCCTCTATG CCGGCGGCGC ACTGTTCGCC GTCGCCGACG GTTTCGGCCC AGGCGCAGAA
CACGGAAACA CCGGCAACGG CGAGGGTGCC GCCTCGGCCA CCGCGGTGGC GGCGTTGCGC
TCCGCCGACA CCGTGGTACC ACCCGAAAAA CTCACCACCA CCCTGCTGGC CGGCTTCCAC
GACGCCCGCG CGAGCGTCAA CCGCGTCGCT GGCGCACCGG ATGCCGGAAC GACACTGACC
GCACTGCTGT GGTCCGGCGC CGATTTCGCC CTCGCCCACG TCGGCGATTC CCGCGCCTAT
CTCGTGCGCG AGGGTGAACT GGAATCGTTG ACCCACGACC ACACCTACGT GCAGTCGTTG
GTGGACGAAG GGCGCCTCAC CCCCGAGGAG GCCCAAACCC ACCCCGAACG CACCACCCTG
GTGCGTGCAC TGTGTGGCCT GAAAACCACC GAACCCGACC TACACCTGCG ACAAGCCATG
CCGGGTGACC GGTATCTGCT GTGCACGGAC GGCGTGTACG CCGTCGTGGA CGACCTGCAG
GAACTGCTGA CCACCGCCAC CGCCCCGCAG GAGGCGGTCG ACCGGATCTC CGCCGCGGCA
CACGCCGCCG GGGCGCCGGA CAACCTGGCC TGCATCGTCG TCGACGTACA CGCCTCCGAC
CACTAG
 
Protein sequence
MAALSIGAFA QACGLTPKAL RLYDELGLLT PARVDACTGY RYYERSQLDR ARLIAWLRGI 
GMPLSRIRVV CDLPRAAAAQ EISTYWHQVE ADIAARRETV SFLVDRLSGK DPTMSAHHTP
VRLNHACVLD RGLVRNTNQD ALYAGGALFA VADGFGPGAE HGNTGNGEGA ASATAVAALR
SADTVVPPEK LTTTLLAGFH DARASVNRVA GAPDAGTTLT ALLWSGADFA LAHVGDSRAY
LVREGELESL THDHTYVQSL VDEGRLTPEE AQTHPERTTL VRALCGLKTT EPDLHLRQAM
PGDRYLLCTD GVYAVVDDLQ ELLTTATAPQ EAVDRISAAA HAAGAPDNLA CIVVDVHASD
H