Gene Svir_19510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19510 
Symbol 
ID8387278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2076393 
End bp2077538 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content68% 
IMG OID644976015 
Producttrypsin family protease proenzyme 
Protein accessionYP_003133797 
Protein GI257055965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.257743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.125325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCGA AGAAGCACAG ACTCGTGGCT CGGATGACCG CGACCGCGAT GCTGGCTGCG 
GGAACGGCCG CGGCGGTCGC CCTGCCCGCG ACCGCGGAAA CGGTGACACC GCAGACGGAA
GTCACGGCCG AGGCGGACCC GATGCTGCAG GCCATGCAGC GCGACCTGGG ACTGACGGCC
CAGGAGGCGC AACAGCGGCT GGAGCAGGAG TCTGTGGCGC GCACGCTGGA CGAGACCCTG
CGCGCCAAGT TGCAGGACAA CTTCGGAGGC TCGTACTACG ACGCCGACAC CGGGACCCTG
GTGGTGGGTG TGACCGAGGC GTCCGCGTTG GACGACGTGC GGGCCGCCGG CGCCAAGGCC
AAGCTCGTCG ACGCCAGCAT CGACGAACTC AACACGGCGG TGGACCGGCT CGACCGCAAG
GAAAGCAGCG CCCCCGAATC GGTCACCGGC TGGTACGTCG ACGTCAAGAA CAACTCGGTG
GTCGTCACCA CCGCGCCCGG CACGGCCGCG CAGGCCGAGA AATTCGTGGC GGCGTCCGGG
GTCGACGGTG ACAACGTCGA GATCGTGGAG TCCACCGAAC AGCCCCGCAC CTTCATGGAC
GTCATCGGCG GCAACGCCTA CTACATGGGT AATGGCGGTC GTTGCTCGGT CGGATTCACC
GTGCAGGGCG GCTTCGTGAC CGCCGGCCAC TGCGGCACCA CCGGCACCTC CACGTCGTCG
CCCAGCGGCA CCTTCGCCGG CTCGTCGTTC CCGGGCAACG ACTACGCCTT CGTCCGCACC
GGTTCCGGTG ACACGCTGCG CCCGTGGGTC AACATGTACA ACGGCTCCGC TCGCGTCGTC
TCCGGCTCCA GCGTGGCCCC GGTCGGCTCG TCGATCTGCC GCTCGGGTTC CACCACCGGC
TGGCACTGCG GCCAGGTCCA GGCCTTCAAC CAGACCGTGC GTTACGCGGA GGGCACCGTC
ACCGGTCTGA CCCGCACCAA CGTCTGCGCC GAGCCGGGTG ACTCGGGTGG CTCGTTCATC
TCGGGCAACC AGGCTCAGGG CATGACCTCC GGTGGCTCCG GTAACTGCAC CTTCGGTGGC
ACCACGTACT TCCAGCCGGT CAACGAAGTA CTGAGCGCCT ACAACCTGAG GCTGATCACC
GGCTGA
 
Protein sequence
MLPKKHRLVA RMTATAMLAA GTAAAVALPA TAETVTPQTE VTAEADPMLQ AMQRDLGLTA 
QEAQQRLEQE SVARTLDETL RAKLQDNFGG SYYDADTGTL VVGVTEASAL DDVRAAGAKA
KLVDASIDEL NTAVDRLDRK ESSAPESVTG WYVDVKNNSV VVTTAPGTAA QAEKFVAASG
VDGDNVEIVE STEQPRTFMD VIGGNAYYMG NGGRCSVGFT VQGGFVTAGH CGTTGTSTSS
PSGTFAGSSF PGNDYAFVRT GSGDTLRPWV NMYNGSARVV SGSSVAPVGS SICRSGSTTG
WHCGQVQAFN QTVRYAEGTV TGLTRTNVCA EPGDSGGSFI SGNQAQGMTS GGSGNCTFGG
TTYFQPVNEV LSAYNLRLIT G