Gene Svir_19420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19420 
Symbol 
ID8387269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2066329 
End bp2066913 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID644976006 
Producthypothetical protein 
Protein accessionYP_003133788 
Protein GI257055956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.643676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0299819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACGG CGATCCCCGC CGTCGCTCAC GCCGACGCCG ACTCCGCTAC CTGGCGGCAG 
AAAACGAGCC TCAACGGATG GCCTGTTCTT TCCGAGGGGG AGACACAACG TTTCCGGATC
GAGGGCAGCG GCTTGTCGGT GCGACTCGCC CCCGCTGCCG CACCCGTGCT GCTGTACGTG
GCTCGAAGAT TCATCTACGA GATCGACTCC CAGCTGCAGG CGGGGGAGAT CACCGGCTAT
ACCGATGACA GGAACATCGC CGCCTCGTAC GAGTCGGCGT ATCTGTCGGG CAGTGGGATC
ACCATTCGAC CCCTGCTGTA TCCGATGGGG GCGGAAAACG GGTTCTTCGA ACACGAAAAG
ATCGTGATCC GCGACATTCT GGCCGACTGT GACGGAGTCA TCGCCTGGGG CGGTGACCTG
GATCCGGTCA AGGAGTCCCA CTTCCACATC ACCGTTCCCG CCACCAGCAG CGAGTATCGG
AACCTGGTGG ACAGGCTGCG CACGTGGGAG GACTCCCCGG GCAAGGGCGC AGGCGCGATC
GACGCCTTCA TTCCGGAACG GCTGCAGCGC GCCGGTTCGA ACTGA
 
Protein sequence
MGTAIPAVAH ADADSATWRQ KTSLNGWPVL SEGETQRFRI EGSGLSVRLA PAAAPVLLYV 
ARRFIYEIDS QLQAGEITGY TDDRNIAASY ESAYLSGSGI TIRPLLYPMG AENGFFEHEK
IVIRDILADC DGVIAWGGDL DPVKESHFHI TVPATSSEYR NLVDRLRTWE DSPGKGAGAI
DAFIPERLQR AGSN