Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19420 |
Symbol | |
ID | 8387269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2066329 |
End bp | 2066913 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976006 |
Product | hypothetical protein |
Protein accession | YP_003133788 |
Protein GI | 257055956 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.643676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0299819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGTACGG CGATCCCCGC CGTCGCTCAC GCCGACGCCG ACTCCGCTAC CTGGCGGCAG AAAACGAGCC TCAACGGATG GCCTGTTCTT TCCGAGGGGG AGACACAACG TTTCCGGATC GAGGGCAGCG GCTTGTCGGT GCGACTCGCC CCCGCTGCCG CACCCGTGCT GCTGTACGTG GCTCGAAGAT TCATCTACGA GATCGACTCC CAGCTGCAGG CGGGGGAGAT CACCGGCTAT ACCGATGACA GGAACATCGC CGCCTCGTAC GAGTCGGCGT ATCTGTCGGG CAGTGGGATC ACCATTCGAC CCCTGCTGTA TCCGATGGGG GCGGAAAACG GGTTCTTCGA ACACGAAAAG ATCGTGATCC GCGACATTCT GGCCGACTGT GACGGAGTCA TCGCCTGGGG CGGTGACCTG GATCCGGTCA AGGAGTCCCA CTTCCACATC ACCGTTCCCG CCACCAGCAG CGAGTATCGG AACCTGGTGG ACAGGCTGCG CACGTGGGAG GACTCCCCGG GCAAGGGCGC AGGCGCGATC GACGCCTTCA TTCCGGAACG GCTGCAGCGC GCCGGTTCGA ACTGA
|
Protein sequence | MGTAIPAVAH ADADSATWRQ KTSLNGWPVL SEGETQRFRI EGSGLSVRLA PAAAPVLLYV ARRFIYEIDS QLQAGEITGY TDDRNIAASY ESAYLSGSGI TIRPLLYPMG AENGFFEHEK IVIRDILADC DGVIAWGGDL DPVKESHFHI TVPATSSEYR NLVDRLRTWE DSPGKGAGAI DAFIPERLQR AGSN
|
| |