Gene Svir_19360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19360 
Symbol 
ID8387263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2060145 
End bp2060804 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID644976001 
Productpredicted membrane protein 
Protein accessionYP_003133783 
Protein GI257055951 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0604968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.138211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG CCGAGACGAA AAGTTCCGTG AGTCGTCGGT GGACCGTCGG TTTGCTGTTG 
TTGCTGACTT TCGTCACCGG ACTCGTGGAC GCCGTGAGTT TCCTGGAACT CGGGCAGGTG
TTCGTCGCGA ACATGACCGG CAACATCACG TTCCTCGGTC TCAGCCTTCA CCCCGACGCG
CATGTCGAAC CGACCACGCC TCTGGTGGCG TTGGGTGGGT TCGTCGTGGG AGCACTGATC
GCCGGGCGGG TGGCGAACCG GTTCGACCGG GCCCCGCGGC GGTGGTTGCC CACGGCGTTC
GGTATCGAGG CTTTCGTCAT CGCCCTGGTG GCGGTGCTGG CCGTGGCTTT GGGAATCCAG
AACGGCACGG TGCATCACCT CGGTGTCCAT GACCTGACCA CCACTGTGCT CACACTTTCC
CTCGCCGGTG TCGTGACCGA CAGTCAGATC GCCCGGGGTC CCATGGCGCG TCCGCATCGG
CGGCTCGGGT CCATCGCCGC CATGTTGGCG GGAGCCGGTG TCGGGGCGCT GTTGTTGTTC
GTGTCACTGA GCCTGGTGCT CGCCCTCGCG GCGAGCGGCA CCGCGGTCGT CGCCACCTGC
TTCGCTCTGG TCGGCCGAGG CGCAGCTGAC ACGGACAACG ATCAAAAACG CAACCGGTGA
 
Protein sequence
MTVAETKSSV SRRWTVGLLL LLTFVTGLVD AVSFLELGQV FVANMTGNIT FLGLSLHPDA 
HVEPTTPLVA LGGFVVGALI AGRVANRFDR APRRWLPTAF GIEAFVIALV AVLAVALGIQ
NGTVHHLGVH DLTTTVLTLS LAGVVTDSQI ARGPMARPHR RLGSIAAMLA GAGVGALLLF
VSLSLVLALA ASGTAVVATC FALVGRGAAD TDNDQKRNR