Gene Svir_19330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19330 
Symbol 
ID8387260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2056119 
End bp2056574 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content66% 
IMG OID644975998 
Producthypothetical protein 
Protein accessionYP_003133780 
Protein GI257055948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.193262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.367636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC ACTGGAAGCT CGTGATCGAC ACCTCGGACG CGCCGACGCT CGCTGATTTC 
TGGGCCGCCG CGCTCGGCTA CGAGGTGGAA GACCAGAGTA CGTTGATCGA CCGCCTGCTG
GCCGCCGGAC AGCTCGACGA CAGTGTCGTC ACCGAGCACC GCGGGCGCCG GACTTTCCGT
GGCTTCGCGG CCATTCGACA TCCGGACGAT CCGTTCGACC GGGACACCGG TGTCGGCCAA
GGGCGCAGGG TGTTGTTTCA GGACGTGCCG GAGCCCAAGA CGGTCAAGAA CCGGCTGCAC
ATCGACGTGC ACGCGGGAGC GGAGGGTCTT GCTGCGCTCG TGGAGCGGTT GGAGTCCCTT
GGCGCGACCC GGATCCGGGA GTTCGACAAG GGTCCGGCCG GACACTGGTG GGTCATGCGT
GATCCGGAAG GAAACGAGTT CTGCGCCGCG CAGTGA
 
Protein sequence
MALHWKLVID TSDAPTLADF WAAALGYEVE DQSTLIDRLL AAGQLDDSVV TEHRGRRTFR 
GFAAIRHPDD PFDRDTGVGQ GRRVLFQDVP EPKTVKNRLH IDVHAGAEGL AALVERLESL
GATRIREFDK GPAGHWWVMR DPEGNEFCAA Q