Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19310 |
Symbol | |
ID | 8387258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2054779 |
End bp | 2055426 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644975996 |
Product | hypothetical protein |
Protein accession | YP_003133778 |
Protein GI | 257055946 |
COG category | [S] Function unknown |
COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0818404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.200215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCGAA ACGGTAGCGG GGTTCGTGGC CCCGGTGTCG CGCACGAACA ACGACGTCGC GACATACTCG AGGCGGTCTT CACGATCGTC GACACCGAAG GCACCGACCA GGTCAGCATC CGCCGCGTTG CGGACACCGC GGGAGTGTCC CTCGGTCGGG TCCAGCACTA CTTCCCCACC AAGGACGCCT TGCTCGCCGA AGCGTTCGCC GCGATCAACG ACCAGGGCGC CGACCGGGTG CGGGAACGCC TCCTGCAGGA GGGGAACACC GCTACCCCTG CAAGGGTGCT CCACGTCGTG TTGACCGAGC TCATCCCCGA CACGGACGCC GAGCGTCGAC TCGTCCGCAT CGCCCAAGCC TTCGAGGCGT ACGCGCACAC GCGCCCCGAG CTCAAGGAAC GTCTCACCCG CGACTACCGC GAACTGGCTT CTTTGCTCAT GCGCCTGCTG CGCGACTGCG TGTACTCACA GGCTGACGCC GGTGGGGACC CCTCGGAGTT TCACGCCGAC GCGTACGAAC TTCTCGCCTT GGCCACCGGG CTGGCCGCAC TGGTCACCAC CGAGAACCTC GACGCCCGGC GGGCTTTCGA CATCATCGCC GCACGCCTGG AGGGCATGCT CGACACGCAC CGCAGAAGGC GCCCCTGA
|
Protein sequence | MRRNGSGVRG PGVAHEQRRR DILEAVFTIV DTEGTDQVSI RRVADTAGVS LGRVQHYFPT KDALLAEAFA AINDQGADRV RERLLQEGNT ATPARVLHVV LTELIPDTDA ERRLVRIAQA FEAYAHTRPE LKERLTRDYR ELASLLMRLL RDCVYSQADA GGDPSEFHAD AYELLALATG LAALVTTENL DARRAFDIIA ARLEGMLDTH RRRRP
|
| |