Gene Svir_19310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19310 
Symbol 
ID8387258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2054779 
End bp2055426 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID644975996 
Producthypothetical protein 
Protein accessionYP_003133778 
Protein GI257055946 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0818404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.200215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGAA ACGGTAGCGG GGTTCGTGGC CCCGGTGTCG CGCACGAACA ACGACGTCGC 
GACATACTCG AGGCGGTCTT CACGATCGTC GACACCGAAG GCACCGACCA GGTCAGCATC
CGCCGCGTTG CGGACACCGC GGGAGTGTCC CTCGGTCGGG TCCAGCACTA CTTCCCCACC
AAGGACGCCT TGCTCGCCGA AGCGTTCGCC GCGATCAACG ACCAGGGCGC CGACCGGGTG
CGGGAACGCC TCCTGCAGGA GGGGAACACC GCTACCCCTG CAAGGGTGCT CCACGTCGTG
TTGACCGAGC TCATCCCCGA CACGGACGCC GAGCGTCGAC TCGTCCGCAT CGCCCAAGCC
TTCGAGGCGT ACGCGCACAC GCGCCCCGAG CTCAAGGAAC GTCTCACCCG CGACTACCGC
GAACTGGCTT CTTTGCTCAT GCGCCTGCTG CGCGACTGCG TGTACTCACA GGCTGACGCC
GGTGGGGACC CCTCGGAGTT TCACGCCGAC GCGTACGAAC TTCTCGCCTT GGCCACCGGG
CTGGCCGCAC TGGTCACCAC CGAGAACCTC GACGCCCGGC GGGCTTTCGA CATCATCGCC
GCACGCCTGG AGGGCATGCT CGACACGCAC CGCAGAAGGC GCCCCTGA
 
Protein sequence
MRRNGSGVRG PGVAHEQRRR DILEAVFTIV DTEGTDQVSI RRVADTAGVS LGRVQHYFPT 
KDALLAEAFA AINDQGADRV RERLLQEGNT ATPARVLHVV LTELIPDTDA ERRLVRIAQA
FEAYAHTRPE LKERLTRDYR ELASLLMRLL RDCVYSQADA GGDPSEFHAD AYELLALATG
LAALVTTENL DARRAFDIIA ARLEGMLDTH RRRRP