Gene Svir_19290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19290 
Symbol 
ID8387256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2053754 
End bp2054209 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content66% 
IMG OID644975994 
Producthypothetical protein 
Protein accessionYP_003133776 
Protein GI257055944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.141605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.269706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGCGACGGTC GGCCCTTCGC GCAAGCTGTC TCGGCCTCGG ACTCACCCTC 
ATCGCGGCGT TCCTGCCGCA TCTGGACCGT GTCACCACCC ATGTGCTGGC CGCGCACATC
CACACCAGCT ACCCCACCTA CACCGAAGAG CAGGTCGACA TCGCCGTCAA CGCCTGGCTG
ATGCTCCTCT CCGTCATCGG CGCACTGGGC GTCCTCGGGT GGATCTGGAC GATGTGGACG
ATCAAAGCCG ACAAACGATG GGCACGCTGG TCAGCGCTTT CGATCTTCGT CATCGCCACG
GGCGTTGCCC TGGCCGCCCT GTTGACCAAG GACACCTCCG GGGACGTCGG CCTGGCTCCC
CCACTGGGAC TGGTCGGCAT CCTGCCGTGT CTGGCCGGAC TGTGGGTCGT CGTGGCGCTG
TGGCGGAAAC CGGCACCGCA ACCGCATACC CGATGA
 
Protein sequence
MTTPRRSALR ASCLGLGLTL IAAFLPHLDR VTTHVLAAHI HTSYPTYTEE QVDIAVNAWL 
MLLSVIGALG VLGWIWTMWT IKADKRWARW SALSIFVIAT GVALAALLTK DTSGDVGLAP
PLGLVGILPC LAGLWVVVAL WRKPAPQPHT R