| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19220 |
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| Symbol | |
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| ID | 8387249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2045673 |
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| End bp | 2046536 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975988 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_003133770 |
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| Protein GI | 257055938 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02438] catechol 1,2-dioxygenase, Actinobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.184485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA CACCCCACGC CCCCGCACCT CCCGCCGCCG AATCCGGCGC CAACGCGACC
CAACGATTCA AGACCGACAA ATCGACACAC CCGGTCAACA CCCCCAAGGA ACGCGTCGAC
CTCCTCGCCC GCGAAGTCCT CGACGCCGTC CACAACACCA TCCGCAAACA CAAAGTCACC
TACGACGAAT ACAACGCCCT CAAGGCATGG CTGATCAGCG TCGGCGAAAC CGGCGAATGG
CCCCTCTTCC TCGACGTCTG GGTCGAACAC GTCGTGGAAG AGGTCGCCAC CGAACACCGA
CAGGGCAACA AAGGCTCCAT CGAAGGCCCC TACTACGTCC CCGGGGCACC ACACCGCGGC
TCCCACGGCG CCGTACCCAT GCGCCAGAAC GAAGCCGGAA CGCCACTCCG GTGGCGAGGA
CGCGTCACCT CCACCGACGG CCACGCCCTG GAACACGCCA CGGTCGAACT GTGGCAAGCC
GACGCCGACG GCCTCTACTC CCAGTTCGCA CCCGGCATCC CCGACTGGAA CCTGCGCGGC
ACCTTCTCCG TCGACAGCGA GGGCCGATTC GAAATCCGCA CCATCCGGCC CGCCCCCTAC
CAAATCCCCA CCGACGGAGC CTGCGGCAAA CTCATCGCTG CCGCCGGATG GCACGCCTGG
CGGCCGGCAC ACCTCCACGT CAAAGTGTCC GCCCCCGGAC ACGAACTGTT GACCGCCCAG
CTGTACTTCC CCGGCGACGA ACACAACGAC GACGACATCG CCTCAGCGGT GAAACCGGAG
TTGATGCTCA ACCCCCGCCC CGCCCCCGAC GGGGACGGCG ACATCGTCCA CTACGACTTC
GTCCTCGACC CCGTACGGGA CTGA
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| Protein sequence | MTTTPHAPAP PAAESGANAT QRFKTDKSTH PVNTPKERVD LLAREVLDAV HNTIRKHKVT
YDEYNALKAW LISVGETGEW PLFLDVWVEH VVEEVATEHR QGNKGSIEGP YYVPGAPHRG
SHGAVPMRQN EAGTPLRWRG RVTSTDGHAL EHATVELWQA DADGLYSQFA PGIPDWNLRG
TFSVDSEGRF EIRTIRPAPY QIPTDGACGK LIAAAGWHAW RPAHLHVKVS APGHELLTAQ
LYFPGDEHND DDIASAVKPE LMLNPRPAPD GDGDIVHYDF VLDPVRD
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